Componentising a scientific application for the grid

Parlavantzas, N., Morel, M., Baude, F., Huet, F., Caromel, D. and Getov, Vladimir 2006. Componentising a scientific application for the grid. CoreGRID.

TitleComponentising a scientific application for the grid
AuthorsParlavantzas, N., Morel, M., Baude, F., Huet, F., Caromel, D. and Getov, Vladimir
TypeTechnical report
FileParlavantzas_et_al_2006_final.pdf
Year25 Apr 2006
PublisherCoreGRID
Web address (URL)http://www.coregrid.net/mambo/images/stories/TechnicalReports/tr-0031.pdf
Digital Object Identifier (DOI)doi:CoreGRIDTechnicalReportNumberTR-0031

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Computing in Asia: a sampling of recent success stories
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GCM: a grid extension to Fractal for autonomous distributed components
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Special roundtable discussion: 70 years electronic digital computing that changed the world
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Dynamic reconfiguration of GCM components
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Advanced Grid programming with components: a biometric identification case study
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Evaluation of dynamic clustering architecture for utilising mobile resources
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Integrated framework for development and execution of component-based Grid applications
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Design and implementation of a hybrid P2P-based Grid resource discovery system
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Methodology for component-based development of grid applications
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Behavioural model of component-based Grid environments
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Automata-based formal specification of stateful systems
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Automata based formal specification of stateful systems
Basso, A., Bolotov, A. and Getov, Vladimir 2008. Automata based formal specification of stateful systems. in: Proceedings of the 15th workshop on automated reasoning: bridging the gap between theory and practice: CICM 2008, Conferences on Intelligent Computer Mathematics, University of Birmingham, UK Birmingham School of Computer Science.

Proceedings of the CoreGRID Workshop on Grid Systems, Tools and Environments, 1st December 2006, Sophia-Antipolis, France
Badia, R.M., Baude, F., Getov, Vladimir, Kielmann, T. and Taylor, I. 2007. Proceedings of the CoreGRID Workshop on Grid Systems, Tools and Environments, 1st December 2006, Sophia-Antipolis, France. CoreGRID.

Problem solving environment for distributed interactive applications
Rycerz, K., Bubak, M., Sloot, P.M.A. and Getov, Vladimir 2007. Problem solving environment for distributed interactive applications. CoreGRID.

Domain-specific metadata for model validation and performance optimisation
Thiyagalingam, J., Getov, Vladimir, Panagiotidi, S., Beckmann, O. and Darlington, J. 2007. Domain-specific metadata for model validation and performance optimisation. CoreGRID.

Design support for componentising and grid-enabling scientific applications
Parlavantzas, N., Getov, Vladimir, Morel, M., Baude, F. and Caromel, D. 2007. Design support for componentising and grid-enabling scientific applications. in: Proceedings of the 2007 symposium on Component and framework technology in high-performance and scientific computing New York, NY, USA ACM. pp. 31-38

Letters to the editor
Getov, Vladimir 2007. Letters to the editor. Solid-State Circuits Newsletter. 12 (4), p. 2.

Corrections
Getov, Vladimir 2007. Corrections. Solid-State Circuits Newsletter. 12 (4), p. 2.

Proceedings of the 2007 symposium on Component and framework technology in high-performance and scientific computing
Bernholdt, D. and Getov, Vladimir 2007. Proceedings of the 2007 symposium on Component and framework technology in high-performance and scientific computing. New York, NY, USA ACM.

Specification and verification of reconfiguration protocols in grid component systems
Basso, A., Bolotov, A., Basukoski, A., Getov, Vladimir, Henrio, L. and Urbanski, M. 2006. Specification and verification of reconfiguration protocols in grid component systems. CoreGRID.

Mapping "heavy" scientific applications on a lightweight grid infrastructure
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Security models for lightweight grid architectures
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Lightweight grid platform: design methodology
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A metadata extracting tool for software components in grid applications
Thiyagalingam, J. and Getov, Vladimir 2006. A metadata extracting tool for software components in grid applications. in: IEEE John Vincent Atanasoff 2006 International Symposium on Modern Computing (JVA'06) Los Alamitos, USA IEEE . pp. 189-196

Dependability in hybrid grid systems: a virtual clusters approach
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Specification and verification of reconfiguration protocols in grid component systems
Basso, A., Bolotov, A., Basukoski, A., Getov, Vladimir, Henrio, L. and Urbanski, M. 2006. Specification and verification of reconfiguration protocols in grid component systems. in: Proceedings of the 3rd IEEE International Conference on Intelligent Systems (IS-2006) Los Alamitos, USA IEEE . pp. 450-455

Towards building a generic grid services platform: a components-oriented approach
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An architecture for a portable grid-enabled engine
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A lightweight platform for integration of mobile devices into pervasive grids
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Integrating mobile devices into the grid: design considerations and evaluation
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A theory of distributed objects: asynchrony, mobility, groups, components
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A hybrid message logging-CIC protocol for constrained checkpointability
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Applying the reflective middleware approach in Grid computing
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Developing grid services with Jini and JXTA
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Computational grid and web services: concepts, functionalities and comparisons
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Improving quality of service in application clusters
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Performance evaluation of hybrid parallel programming paradigms
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Using Java for plasma PIC simulations
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Mixed language high-performance computing for plasma simulations
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Intelligent fault tolerant architecture for cluster computing: a high level overview
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Intelligent architecture for automatic resource allocation in computer clusters
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Improving quality of service in application clusters
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Cluster infrastructure for biological and health related research
Corsava, S. and Getov, Vladimir 2003. Cluster infrastructure for biological and health related research. in: 3rd IEEE International Symposium on Cluster Computing and the Grid (Ccgrid 2003) USA IEEE . pp. 574-581

Autonomous agents-based security infrastructure
Corsava, S. and Getov, Vladimir 2003. Autonomous agents-based security infrastructure. in: Computational Science and Its Applications: ICCSA 2003 Berlin, Germany Springer.

Agent-based service management in large datacentres and grids
Corsava, S. and Getov, Vladimir 2003. Agent-based service management in large datacentres and grids. in: 3rd IEEE/ACM International Symposium on Cluster Computing and the Grid (Ccgrid 2003) USA IEEE . pp. 633-640

The design of a configurable and reconfigurable middleware platform
Coulson, G., Blair, G.S., Clarke, M. and Parlavantzas, N. 2002. The design of a configurable and reconfigurable middleware platform. Distributed Computing. 15 (2), pp. 109-126.

Performance comparisons of basic openMP constructs
Prabhakar, A., Getov, Vladimir and Chapman, B. 2002. Performance comparisons of basic openMP constructs. in: Zima, H.P., Joe, K., Sato, M., Seo, Y. and Shimasaki, M. (ed.) High performance computing : 4th International Symposium, ISHPC 2002, Kansai Science City, Japan, May 15-17, 2002: proceedings Berlin, Germany Springer.

Assignment schemes for replicated services in Jini
Georgiev, V. and Getov, Vladimir 2002. Assignment schemes for replicated services in Jini. in: Ferenc, V. and Podhorszki, N. (ed.) Proceedings of the 10th Euromicro Workshop on Parallel, Distributed, and Network-based Processing: Canary Islands, Spain, January 9-11, 2002 Los Alamitos, USA IEEE . pp. 129-136

Towards automatic creation of Web services for Grid component composition
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Simulation of replicated services in Jini
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Multiparadigm communications in Java for grid computing
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JavaGrande - high performance computing with Java
Philippsen, M., Boisvert, R.F., Getov, Vladimir, Pozo, R., Moreira, J.E., Gannon, D. and Fox, G.C. 2001. JavaGrande - high performance computing with Java. in: Sørevik, T., Manne, F., Moe, R. and Gebremedhin, A.H. (ed.) Applied parallel computing. New paradigms for HPC in industry and academia: 5th International Workshop, PARA 2000 Bergen, Norway, June 18–20, 2000 proceedings Berlin ; London Springer.

Java communications for large-scale parallel computing
Getov, Vladimir and Philippsen, M. 2001. Java communications for large-scale parallel computing. in: Margenov, S., Waʹsniewski, J. and Yalamov, P. (ed.) Large-scale scientific computing: Third International Conference, LSSC 2001 Sozopol, Bulgaria, June 6–10, 2001 revised papers Berlin ; London Springer.

Message-passing computing with Java: performance evaluation and comparisons
Getov, Vladimir, Lu, Q., Thomas, M. and Williams, M. 2001. Message-passing computing with Java: performance evaluation and comparisons. in: Proceedings of the Ninth Euromicro Workshop on Parallel and Distributed Processing, 2001 IEEE . pp. 173-177

A mixed-language programming methodology for high performance Java computing
Getov, Vladimir 2001. A mixed-language programming methodology for high performance Java computing. in: Boisvert, R.F. and Tang, P.T.P. (ed.) The architecture of scientific software: IFIP TC2/WG2.5 Working Conference on the Architecture of Scientific Software, October 2-4, 2000, Ottawa, Canada London, UK Kluwer Academic. pp. 351-364

Guest editorial: Java in high-performance computing
Getov, Vladimir 2001. Guest editorial: Java in high-performance computing. Future Generation Computer Systems. 18 (2), pp. v-vi.

MPJ: MPI-like message passing for Java
Carpenter, B., Getov, Vladimir, Judd, G., Skjellum, A. and Fox, G.C. 2000. MPJ: MPI-like message passing for Java. Concurrency: Practice and Experience. 12 (11), pp. 1019-1038.

Programming languages, models, and methods
Kelly, P.H.J., Gorlatch, S., Baden, S. and Getov, Vladimir 2000. Programming languages, models, and methods. in: Bode, A., Ludwig, T., Karl, W. and Wismuller, R. (ed.) Euro-Par 2000 Parallel Processing Springer.

Panel on Metacomputing
Getov, Vladimir, Kacsuk, P., Kesselman, C., Kloeckner, K., Laforenza, D. and Vajda, F. 2000. Panel on Metacomputing. in: Proceedings: 8th Euromicro Workshop on Parallel and Distributed Processing, January 19-21, 2000 IEEE . pp. 254

Aspects of portability and distributed execution for JNI-wrapped message passing libraries
Getov, Vladimir, Gray, P. and Sunderam, V.S. 2000. Aspects of portability and distributed execution for JNI-wrapped message passing libraries. Concurrency: Practice and Experience. 12 (11), pp. 1039-1050.

Obituaries: Roger Hockney
Getov, Vladimir 1999. Obituaries: Roger Hockney. SIAM News. 32 (5).

Design issues for efficient implementation of MPI in Java
Judd, G., Clement, M., Snell, Q. and Getov, Vladimir 1999. Design issues for efficient implementation of MPI in Java. in: Proceedings of the ACM 1999 conference on Java Grande New York ACM. pp. 58-65

Performance optimisations of the NPB FT kernel by special-purpose unroller
Getov, Vladimir, Wei, Y., Carter, L. and Gatlin, K.S. 1999. Performance optimisations of the NPB FT kernel by special-purpose unroller. in: Proceedings of the Seventh Euromicro Workshop on Parallel and Distributed Processing (PDP '99) IEEE . pp. 84-88

MPI and Java-MPI: contrasts and comparisons of low-level communication performance
Getov, Vladimir, Gray, P. and Sunderam, V.S. 1999. MPI and Java-MPI: contrasts and comparisons of low-level communication performance. in: Proceedings of the 1999 ACM/IEEE conference on Supercomputing New York ACM/IEEE. pp. 58-65

Multi-language programming environments for high performance Java computing
Getov, Vladimir, Gray, P., Mintchev, S. and Sunderam, V.S. 1999. Multi-language programming environments for high performance Java computing. Scientific Programming. 7 (2), pp. 139-146.

A programming environment for high-performance computing in Java
Getov, Vladimir, Flynn-Hummel, S. and Mintchev, S. 1999. A programming environment for high-performance computing in Java. in: Allan, R., Guest, M.F., Simpson, A.D., Henty, D.S. and Nicole, D. (ed.) High performance computing New York Kluwer Academic / Phenum Publishers. pp. 559-568

MPI for Java
Carpenter, B., Getov, Vladimir, Judd, G., Skjellum, A. and Fox, G.C. 1999. MPI for Java. in: Proceedings of MPIDC’99 Conference MPI SoftTech Press. pp. 123-132

MPI for Java: position document and draft API specification
Carpenter, B., Bryan, Getov, Vladimir, Vladimir, Judd, G., Glenn, Skjellum, A., Anthony and Fox, G.C. 1998. MPI for Java: position document and draft API specification. JGF-TR-03 Java Grande Forum.

High-performance parallel programming in Java: exploiting native libraries
Getov, Vladimir, Flynn-Hummel, S. and Mintchev, S. 1998. High-performance parallel programming in Java: exploiting native libraries. Concurrency: Practice and Experience. 10 (11), pp. 863-872.

Low-level benchmarking: performance profiles
Hockney, R.W. and Getov, Vladimir 1998. Low-level benchmarking: performance profiles. in: Proceedings of the Sixth Euromicro Workshop on Parallel and Distributed Processing (PDP '98) IEEE . pp. 50-56

Towards portable message passing in Java: binding MPI
Mintchev, S. and Getov, Vladimir 1997. Towards portable message passing in Java: binding MPI. in: Bubak, M., Dongarra, J. and Wagniewski, J. (ed.) Recent advances in parallel virtual machine and message passing interface: 4th European PVM/MPI Users' Group Meeting Cracow, Poland, November 3–5, 1997 proceedings Berlin ; London Springer.

PMPI: high-level message passing in Fortran77 and C
Mintchev, S. and Getov, Vladimir 1997. PMPI: high-level message passing in Fortran77 and C. in: Hertzberger, B. and Sloot, P.M.A. (ed.) High-Performance Computing and Networking: International Conference and Exhibition Vienna, Austria, April 28–30, 1997 proceedings Berlin ; London Springer.

Automatic binding of native scientific libraries to Java
Mintchev, S. and Getov, Vladimir 1997. Automatic binding of native scientific libraries to Java. in: Ishikawa, Y., Oldehoeft, R.R., Reynders, J.V.W. and Tholburn, M. (ed.) Scientific computing in object-oriented parallel environments: first international conference, ISCOPE 97 Marina del Rey, California, USA December 8–11, 1997 proceedings Berlin ; London Springer.

Message-passing performance of parallel computers
Getov, Vladimir, Hernandez, E. and Hey, T. 1997. Message-passing performance of parallel computers. in: Lengauer, C., Griebl, M. and Gorlatch, S. (ed.) Euro-Par'97 Parallel Processing: Third International Euro-Par Conference Passau, Germany, August 26–29, 1997 proceedings Berlin ; London Springer.

Massively parallel computing in Java
Getov, Vladimir, Flynn-Hummel, S. and Mintchev, S. 1997. Massively parallel computing in Java. in: Proceedings of the Third Working Conference on Massively Parallel Programming Models, 1997 IEEE . pp. 112-117

Benchmarking the cache memory effect
Getov, Vladimir 1996. Benchmarking the cache memory effect. in: Dongarra, J., Madsen, K. and Wasniewski, J. (ed.) Applied Parallel Computing Computations in Physics, Chemistry and Engineering Science: Berlin ; London Springer.

The GENESIS distributed memory benchmarks. Part 2: COMMS1, TRANS1, FFT1 and QCD2 benchmarks on the suprenum and IPSC/860 computers
Hey, T., Hockney, R.W., Getov, Vladimir, Wolton, I.C., Merlin, J. and Allwright, J. 1995. The GENESIS distributed memory benchmarks. Part 2: COMMS1, TRANS1, FFT1 and QCD2 benchmarks on the suprenum and IPSC/860 computers. Concurrency: Practice and Experience. 7 (6), pp. 543-570.

Performance characterisation of the cache memory effect
Getov, Vladimir 1995. Performance characterisation of the cache memory effect. Supercomputer. XI (4), pp. 31-49.

Benchmarking for distributed memory parallel systems: gaining insight from numbers
Addison, C., Getov, Vladimir, Hey, T., Hockney, R.W. and Wolton, I.C. 1994. Benchmarking for distributed memory parallel systems: gaining insight from numbers. Parallel Computing. 20 (10-11), pp. 1653-1668.

Comparison of HPF-like Systems
Getov, Vladimir, Brandes, T., Chapman, B., Dunlop, A., Hey, T. and Pritchard, D. 1994. Comparison of HPF-like Systems. Deliverable Report D4.3.a, ESPRIT Project P6643 PPPE.

PARKBENCH Report -1: Public International Benchmarks for Parallel Computers, Technical Report: UT-CS-93-213
Bailey, D., Berry, M., Dongarra, J., Getov, Vladimir, Haupt, T., Hey, T., Hockney, R.W. and Walker, D. 1994. PARKBENCH Report -1: Public International Benchmarks for Parallel Computers, Technical Report: UT-CS-93-213. Knoxville, USA University of Tennessee.

PARKBENCH Report - 1: Public international benchmarks for parallel computers
Bailey, D., Berry, M., Dongarra, J., Getov, Vladimir, Haupt, T., Hey, T., Hockney, R.W. and Walker, D. 1994. PARKBENCH Report - 1: Public international benchmarks for parallel computers. Scientific Programming. 3 (2), pp. 101-146.

Performance visualisation in a portable parallel programming environment
Glendining, I., Getov, Vladimir, Hey, T., Hockney, R.W. and Wolton, I.C. 1993. Performance visualisation in a portable parallel programming environment. in: Kotsis, G. and Haring, G. (ed.) Performance measurement and visualization of parallel systems Amsterdam ; New York Elsevier.

Performance analysis of distributed applications by suitability functions
Getov, Vladimir, Hockney, R.W. and Hey, T. 1993. Performance analysis of distributed applications by suitability functions. in: Proceedings of Programming Models for Massively Parallel Computers, 1993 IEEE . pp. 191-197

Comparative performance analysis of uniformly distributed applications
Getov, Vladimir and Hockney, R.W. 1993. Comparative performance analysis of uniformly distributed applications. in: Proceedings of the Euromicro Workshop on Parallel and Distributed Processing 1993 IEEE . pp. 259-262

The GENESIS distributed memory benchmarks
Getov, Vladimir, Hey, T., Hockney, R.W. and Wolton, I.C. 1993. The GENESIS distributed memory benchmarks. in: 1993 Research Journal Department of Electronics and Computer Science, University of Southampton. pp. 98-101

The GENESIS benchmark suite: current state and results
Getov, Vladimir, Hey, T., Hockney, R.W. and Wolton, I.C. 1993. The GENESIS benchmark suite: current state and results. in: Proceedings of Workshop on Performance Evaluation of Parallel Systems - PEPS'93 Coventry Printers. pp. 182-190

The GENESIS benchmark suite manual. Release 2
Getov, Vladimir, Hey, T., Hockney, R.W. and Wolton, I.C. 1993. The GENESIS benchmark suite manual. Release 2. SNARC, University of Southampton.

The GENESIS distributed-memory benchmarks
Addison, C., Getov, Vladimir, Hey, T., Hockney, R.W. and Wolton, I.C. 1993. The GENESIS distributed-memory benchmarks. in: Dongarra, J. and Gentzscg, W. (ed.) Computer benchmarks Amsterdam ; London Elsevier.

The GENESIS distributed-memory benchmarks. Part 1: Methodology and general relativity benchmark with results for the SUPRENUM computer
Addison, C., Allwright, J., Binsted, N., Bishop, N., Carpenter, B., Dalloz, P., Gee, D., Getov, Vladimir, Hey, T., Hockney, R.W., Lemke, M., Merlin, J., Pinches, P., Scott, C. and Wolton, I. 1993. The GENESIS distributed-memory benchmarks. Part 1: Methodology and general relativity benchmark with results for the SUPRENUM computer. Concurrency: Practice and Experience. 5 (1), pp. 1-22.

Final report on benchmark suite
Wolton, I.C., Getov, Vladimir, Hockney, R.W. and Hey, T. 1992. Final report on benchmark suite. Working paper D2.5.1, ESPRIT Project P2702 GENESIS.

Mid-term report on benchmark suite
Wolton, I.C., Getov, Vladimir, Hockney, R.W. and Hey, T. 1992. Mid-term report on benchmark suite. Working paper D2.5.1, ESPRIT Project P2702 GENESIS.

Benchmarking for MPP procurement. Mid-term report
Getov, Vladimir 1992. Benchmarking for MPP procurement. Mid-term report. University of Southampton.

1-Dimensional parallel FFT benchmark on SUPRENUM
Getov, Vladimir 1992. 1-Dimensional parallel FFT benchmark on SUPRENUM. in: PARLE '92 Parallel Architectures and Languages Europe: 4th International PARLE Conference Paris, France, June 15–18, 1992 proceedings Berlin ; London Springer.

Simulation facility of distributed memory system with 'mad postman' communication network
Getov, Vladimir and Jesshope, C.R. 1991. Simulation facility of distributed memory system with 'mad postman' communication network. in: Bode, A. (ed.) Distributed memory computing: 2nd European Conference, EDMCC2 Munich, FRG, April 22–24, 1991 proceedings Berlin ; London Springer.

Evaluation facility for high-speed network systems
Simonski, K., Getov, Vladimir and Arabadjiski, Y. 1990. Evaluation facility for high-speed network systems. Informatik Informationen Reporte. 10, pp. 48-62.

Architecture of a high-speed network interconnection unit
Kardjiev, T. and Getov, Vladimir 1990. Architecture of a high-speed network interconnection unit. Informatik Informationen Reporte. 6, pp. 93-100.

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