Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

Deutsch, E.W., Ball, C.A., Berman, J.J., Bova, G.S., Brazma, A., Bumgarner, R.E., Campbell, D., Causton, H.C., Christiansen, J.H., Daian, F., Dauga, D., Davidson, D.R., Gimenez, G., Goo, Y.A., Grimmond, S., Henrich, T., Herrmann, B.G., Johnson, M.H., Korb, M., Mills, J.C., Oudes, A.J., Parkinson, H.E., Pascal, L.E., Pollet, N., Quackenbush, J., Ramialison, M., Ringwald, M., Salgado, D., Sansone, S.A., Sherlock, G., Stoeckert Jr, C.J., Swedlow, J., Taylor, R.C., Walashek, L., Warford, A., Wilkinson, D., Zhou, Y., Zon, L.I., Liu, A.Y., True, L.D. and Stoeckert Jr, Christian J. 2008. Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). Nature Biotechnology. 26 (3), pp. 305-312. https://doi.org/10.1038/nbt1391

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Title	Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)
Authors	Deutsch, E.W., Ball, C.A., Berman, J.J., Bova, G.S., Brazma, A., Bumgarner, R.E., Campbell, D., Causton, H.C., Christiansen, J.H., Daian, F., Dauga, D., Davidson, D.R., Gimenez, G., Goo, Y.A., Grimmond, S., Henrich, T., Herrmann, B.G., Johnson, M.H., Korb, M., Mills, J.C., Oudes, A.J., Parkinson, H.E., Pascal, L.E., Pollet, N., Quackenbush, J., Ramialison, M., Ringwald, M., Salgado, D., Sansone, S.A., Sherlock, G., Stoeckert Jr, C.J., Swedlow, J., Taylor, R.C., Walashek, L., Warford, A., Wilkinson, D., Zhou, Y., Zon, L.I., Liu, A.Y., True, L.D. and Stoeckert Jr, Christian J.
Abstract	One purpose of the biomedical literature is to report results in sufficient detail that the methods of data collection and analysis can be independently replicated and verified. Here we present reporting guidelines for gene expression localization experiments: the minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE). MISFISHIE is modeled after the Minimum Information About a Microarray Experiment (MIAME) specification for microarray experiments. Both guidelines define what information should be reported without dictating a format for encoding that information. MISFISHIE describes six types of information to be provided for each experiment: experimental design, biomaterials and treatments, reporters, staining, imaging data and image characterizations. This specification has benefited the consortium within which it was developed and is expected to benefit the wider research community. We welcome feedback from the scientific community to help improve our proposal.
Journal	Nature Biotechnology
Journal citation	26 (3), pp. 305-312
ISSN	1087-0156
Year	2008
Publisher	Nature Publishing Group
Digital Object Identifier (DOI)	https://doi.org/10.1038/nbt1391
Published	2008

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Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

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