The Digital Health Evidence Generator

Objectives and Achievements of the HUMN project on its 26th Anniversary
Fenech, Michael, Holland, Nina, Zeiger, Errol, Chang, Peter Wushou, Kirsch-Volders, Micheline, Bolognesi, Claudia, Stopper, Helga, Knudsen, Lisbeth E., Knasmueller, Siegfried, Nersesyan, Armen, Thomas, Philip, Dhillon, Varinderpal, Deo, Permal, Franzke, Bernhard, Andreassi, Maria-Grazia, Laffon, Blanca, Wagner, Karl-Heinz, Norppa, Hannu, da Silva, Juliana, Volpi, Emanuela, Wilkins, Ruth and Bonassi, Stefano 2024. Objectives and Achievements of the HUMN project on its 26th Anniversary. Mutation Research/Reviews in Mutation Research. 794 108511. https://doi.org/10.1016/j.mrrev.2024.108511

Single-telomere length analysis (STELA) identifies accelerated genome ageing in adolescents with severe obesity
Volpi, E. 2024. Single-telomere length analysis (STELA) identifies accelerated genome ageing in adolescents with severe obesity. UKEMS 2024. Bath 07 - 10 Jul 2024 United Kingdom Environmental Mutagen Society.

Preprint: A foggy minefield: Experiences of regulation among developers of AI and other medical software in the UK, survey and focus group study
Henry W.W. Potts, Paulina Bondaronek, Ana Luisa Neves, Alex Bolotov, Lucie Burgess, Jona Shehu, Gabriella Spinellli, Emanuela Volpi and Austen El-Osta 2024. Preprint: A foggy minefield: Experiences of regulation among developers of AI and other medical software in the UK, survey and focus group study. medRxiv. https://doi.org/10.1101/2024.08.25.24312551

A Sound and Complete Algorithm to Identify Independent Variables in a Reactive System Specification
Oca, Josu, Hermo, Montserrat and Bolotov, Alexander 2024. A Sound and Complete Algorithm to Identify Independent Variables in a Reactive System Specification. 2024 Design, Automation & Test in Europe Conference & Exhibition. Valencia, Spain 25 - 27 Mar 2024 IEEE . pp. 1-2 https://doi.org/10.23919/date58400.2024.10546630

MD-1 downregulation is associated with reduced cell surface CD180 expression in CLL
Edwards, K., Manoussaka, M., Sayed, U., Tsertsvadze, T., De Deyn, L., Nathwani, A., Gribben, J.G., Krysov, S., Volpi, E., Lydyard, P. and Porakishvili, N. 2024. MD-1 downregulation is associated with reduced cell surface CD180 expression in CLL. Leukemia Research. 143 107540. https://doi.org/10.1016/j.leukres.2024.107540

Applications Model: A High-Level Design Model for Rich Web-Based Applications
Dissanayake, Nalaka and Bolotov, Alexander 2024. Applications Model: A High-Level Design Model for Rich Web-Based Applications. 19th International Conference on Evaluation of Novel Approaches to Software Engineering. Angers, France 28 - 29 Apr 2024 SCITEPRESS – Science and Technology Publications. https://doi.org/10.5220/0012605600003687

Nutrigenomics-guided lifestyle intervention programmes: A critical scoping review with directions for future research
Aljasir, S., Eid, N., Volpi, E. and Tewfik, I. 2024. Nutrigenomics-guided lifestyle intervention programmes: A critical scoping review with directions for future research. Clinical Nutrition ESPEN. 64, pp. 296-306. https://doi.org/10.1016/j.clnesp.2024.10.149

The buccal micronucleus cytome assay: New horizons for its implementation in human studies
Fenech, M., Knasmueller, S., Nersesyan, A., Bolognesi, C., Wultsch, G., Schunck, C., Volpi, E. and Bonassi, S. 2024. The buccal micronucleus cytome assay: New horizons for its implementation in human studies. Mutation Research: Genetic Toxicology and Environmental Mutagenesis. 894 503724. https://doi.org/10.1016/j.mrgentox.2023.503724

Digital Health Evidence Generation Ontology Prototype
Bolotov, A. 2023. Digital Health Evidence Generation Ontology Prototype.

High-level Design Models for Rich Web-based Applications
Dissanayake, N.R., Bolotov, A. and Courtenage, S. 2023. High-level Design Models for Rich Web-based Applications. Showcasing Research at the School of Computer Science and Engineering. Regent cinema, Regent street, London 22 Nov 2023 University of Westminster.

Design Methodoolgy for Rich Web-based Appllications
Dissanayake, N.R., Bolotov, A. and Courtenage, S. 2023. Design Methodoolgy for Rich Web-based Appllications.

Different Conversations Podcast: Obesity as a genotoxic environment
Volpi, E. 2023. Different Conversations Podcast: Obesity as a genotoxic environment. University of Westminster.

Biomonitoring and predictive modelling of genomic instability in childhood obesity
Usman, M., Woloshynowych, M., Carrilho Britto, J., Bilkevic, I., Glassar, B., Chapman, S., Ford-Adams, M., Desai, A., Bain, M., Tewfik, I. and Volpi, E. 2023. Biomonitoring and predictive modelling of genomic instability in childhood obesity. Spanish Journal of Environmental Mutagenesis and Genomics. 27 (1), p. 169.

The role of CD180 in hematological malignancies and inflammatory disorders
Edwards, K., Lydyard, P., Kulikova, N., Tsertsvadze, T., Volpi, E.V., Chiorazzi, N. and Porakishvili, N. 2023. The role of CD180 in hematological malignancies and inflammatory disorders. Molecular Medicine. 29, p. 97 https://molmed.biomedcentral.com/articles/10.1186/s10020-023-00682-x. https://doi.org/10.1186/s10020-023-00682-x

Tableaux and Sequent Calculi for CTL and ECTL: Satisfiability Test with Certifying Proofs and Models
Bolotov, A., Garcia-Closas, M., Lucio, P. and Abuin, A. 2023. Tableaux and Sequent Calculi for CTL and ECTL: Satisfiability Test with Certifying Proofs and Models. Journal of Logical and Algebraic Methods in Programming. 130 100828. https://doi.org/10.1016/j.jlamp.2022.100828

Toward a reference architecture based science gateway framework with embedded e‐learning support
Pierantoni, G., Kiss, T., Bolotov, A., Kagialis, D., James DesLauriers, Ullah, A., Chen, H., Chan You Fee, D., Dang, H., Kovacs, J., Belehaki, A., Herekakis, T., Tsagouri, I. and Gesing, S. 2023. Toward a reference architecture based science gateway framework with embedded e‐learning support. Concurrency and Computation: Practice and Experience. 35 (18) e6872. https://doi.org/10.1002/cpe.6872

A correlational analysis of COVID-19 incidence and mortality and urban determinants of vitamin D status across the London boroughs
Borna, M., Woloshynowych, M., Schiano-Phan, R., Volpi, E. and Usman, M. 2022. A correlational analysis of COVID-19 incidence and mortality and urban determinants of vitamin D status across the London boroughs. Scientific Reports. 12 (1) 11741. https://doi.org/10.1038/s41598-022-15664-y

Obesity as a genotoxic environment: how biomonitoring and predictive modelling of genomic instability in childhood obesity provide opportunities for early intervention
Volpi, E. 2022. Obesity as a genotoxic environment: how biomonitoring and predictive modelling of genomic instability in childhood obesity provide opportunities for early intervention. 44th UKEMS Conference 2022. Royal Hall, Harrogate 03 - 06 Jul 2022

Developing a Generic Predictive Computational Model using Semantic data Pre-Processing with Machine Learning Techniques and its application for Stock Market Prediction Purposes
Yerashenia, N., Chan You Fee, D. and Bolotov, A. 2022. Developing a Generic Predictive Computational Model using Semantic data Pre-Processing with Machine Learning Techniques and its application for Stock Market Prediction Purposes. 24th IEEE International Conference on Business Informatics (IEEE CBI 2022). Amsterdam 15 - 17 Jun 2022 IEEE . https://doi.org/10.1109/CBI54897.2022.00013

Sharing Data Collections and Models for Ionosphere, Thermosphere and Plasmasphere Research
Kiss, T., Pierantoni, G., Kagialis, D., Bolotov, A., Chan You Fee, D., Belehaki, A. and Galkin, I. 2022. Sharing Data Collections and Models for Ionosphere, Thermosphere and Plasmasphere Research. IWSG 2022. Trento, Italy 15 - 17 Jun 2022

Proceedings of the 5th Student-STAFF Research Conference
Bolotov, A. Bolotov, A. (ed.) 2022. Proceedings of the 5th Student-STAFF Research Conference. University of Westminster.

On the Expressive Power of the Normal Form for Branching-Time Temporal Logics
Bolotov, Alexander 2022. On the Expressive Power of the Normal Form for Branching-Time Temporal Logics. Electronic Proceedings in Theoretical Computer Science. 358, pp. 254-269. https://doi.org/10.4204/eptcs.358.19

Expression patterns of CD180 in the lymph nodes of patients with chronic lymphocytic leukaemia
Edwards, K., Volpi, E., Lydyard, P., Zaitseva, K., Sayed, U., Krysov, S., Gribben, J., Nathwani, D.A. and Porakishvili, N. 2021. Expression patterns of CD180 in the lymph nodes of patients with chronic lymphocytic leukaemia. British Journal of Haematology. 195 (2), pp. e131-e134. https://doi.org/10.1111/bjh.17680

Obesity, oxidative DNA damage and vitamin D as predictors of genomic instability in children and adolescents
Usman, M., Woloshynowych, M., Britto, J.C., Bilkevic, I., Glassar, B., Chapman, S., Ford-Adams, M.E., Desai, A., Bain, M., Tewfik, I. and Volpi, E. 2021. Obesity, oxidative DNA damage and vitamin D as predictors of genomic instability in children and adolescents. International Journal of Obesity. 45, p. 2095–2107. https://doi.org/10.1038/s41366-021-00879-2

PITHIA-NRF e-Science Centre – A Science Gateway based on Cloud-based Reference Architectures
Pierantoni, G., Kiss, T. and Bolotov, A. 2021. PITHIA-NRF e-Science Centre – A Science Gateway based on Cloud-based Reference Architectures. 13th International Workshop on Science Gateways. Virtual event 10 - 11 Jun 2021 CEUR Workshop Proceedings.

Patient-specific Alzheimer-like pathology in trisomy 21 cerebral organoids reveals BACE2 as a gene dose-sensitive AD suppressor in human brain
Alić, I., Goh, P.A., Murray, A., Portelius, E., Gkanatsiou, E., Gough, G., Mok, K.Y., Koschut, D., Brunmeir, R., Yeap, Y.J., O'Brien, N.L., Groet, J., Shao, X,, Havlicek, S., Dunn, N.R., Kvartsberg, H., Brinkmalm, G., Hithersay, R,, Startin, C., Hamburg, S., Phillips, M., Pervushin, K., Turmaine, M., Wallon, D., Rovelet-Lecrux, A., Soininen, H., Volpi, E., Martin, J.E., Foo, J.N., Becker, D.L., Rostagno, A., Ghiso, J., Krsnik, Ž., Šimić, G., Kostović, I., Mitrečić, D., LonDownS Consortium, Francis, P.T., Blennow, K., Strydom, A., Hardy, J., Zetterberg, H. and Nižetić, D. 2021. Patient-specific Alzheimer-like pathology in trisomy 21 cerebral organoids reveals BACE2 as a gene dose-sensitive AD suppressor in human brain. Molecular Psychiatry. 26, p. 5766–5788. https://doi.org/10.1038/s41380-020-0806-5

SMARTEST - knowledge and learning repository
Bolotov, A., Pierantoni, G., Chan You Fee, D., Wojtunik, D., Ivanauskaite, G., Tait, C., Makadicy, W., Wasowski, T., Kulczynska, A. and Yerashenia, N. 2020. SMARTEST - knowledge and learning repository . University of Westminster.

Proceedings of the 4th Student-STAFF Research Conference 2020 School of Computer Science and Engineering SSRC2020
Bolotov, A. Bolotov, A. (ed.) 2020. Proceedings of the 4th Student-STAFF Research Conference 2020 School of Computer Science and Engineering SSRC2020. University of Westminster.

One-pass Context-based Tableaux Systems for CTL and ECTL
Abuin, A., Bolotov, A., Hermo, M. and Lucio, P. 2020. One-pass Context-based Tableaux Systems for CTL and ECTL. 27th International Symposium on Temporal Representation and Reasoning. Bozen-Bolzano, Italy 23 - 25 Sep 2020 Schloss Dagstuhl – Leibniz-Zentrum für Informatik, Dagstuhl Publishing, Germany. https://doi.org/10.4230/LIPIcs.TIME.2020.14

Science Gateways with Embedded Ontology-based E-learning Support
Kiss, T., Bolotov, A., Pierantoni, G., Deslauriers, J., MOSA, A., Kagialis, D., Terstyanszky, G. and Chan You Fee, D. 2020. Science Gateways with Embedded Ontology-based E-learning Support. Gesing, S., Taylor, I. and Barclay, I (ed.) 12th International Workshop on Science Gateways. On-line 10 - 11 Jun 2020 CEUR Workshop Proceedings.

Semantic Data Pre-Processing for Machine Learning Based Bankruptcy Prediction Computational Model
Yerashenia, N., Bolotov, A., Chan You Fee, D. and Pierantoni, G. 2020. Semantic Data Pre-Processing for Machine Learning Based Bankruptcy Prediction Computational Model. 22nd IEEE International Conference on Business Informatics (IEEE CBI 2020) . Antwerp, Belgium 22 - 24 Jun 2020 IEEE . https://doi.org/10.1109/CBI49978.2020.00015

Branching-time logic ECTL# and its tree-style one-pass tableau: Extending fairness expressibility of ECTL+
Bolotov, A., Hermo, M. and Lucio, P. 2020. Branching-time logic ECTL# and its tree-style one-pass tableau: Extending fairness expressibility of ECTL+. Theoretical Computer Science. 813, pp. 428-451. https://doi.org/10.1016/j.tcs.2020.02.015

Towards Architectural Design Method for Rich Web-based Applications
Dissanayake, N.R., Bolotov, A. and Courtenage, S. 2019. Towards Architectural Design Method for Rich Web-based Applications. 2019 CSE Doctoral Conference. University of Westminster May 2019

Extending Fairness Expressibility of ECTL+: A Tree-Style One-Pass Tableau Approach
Bolotov, A., Hermo, M. and Lucio, P. 2019. Extending Fairness Expressibility of ECTL+: A Tree-Style One-Pass Tableau Approach. 19th Spanish Conference on Programming and Computer Languages. Sep 2019 Spanish Society of Software Engineering and Software Development Technologies.

Proceedings of the Automated Reasoning Workshop (ARW 2019)
Bolotov, A. and Kammueller, F. 2019. Proceedings of the Automated Reasoning Workshop (ARW 2019). London

Creating an Intelligent System for Bankruptcy Detection: Semantic data Analysis Integrating Graph Database and Financial Ontology
Yerashenia, N. and Bolotov, A. 2019. Creating an Intelligent System for Bankruptcy Detection: Semantic data Analysis Integrating Graph Database and Financial Ontology. Automated Reasoning Workshop 2019: Bridging the Gap between Theory and Practice. University of Middlesex 02 - 03 Sep 2019 Middlesex University.

Towards Certified Model Checking for PLTL using One-pass Tableaux
Abuin, A., Bolotov, A., de Cerio, U., Hermo, M. and Lucio, P. 2019. Towards Certified Model Checking for PLTL using One-pass Tableaux. 26th International Symposium on Temporal Representation and Reasoning, TIME 2019. Malaga, Spain 16 - 19 Oct 2019 Schloss Dagstuhl – Leibniz-Zentrum für Informatik, Dagstuhl Publishing, Germany. https://doi.org/10.4230/LIPIcs.TIME.2019.12

Computational Modelling for Bankruptcy Prediction: Semantic data Analysis Integrating Graph Database and Financial Ontology
Yerashenia, N. and Bolotov, A. 2019. Computational Modelling for Bankruptcy Prediction: Semantic data Analysis Integrating Graph Database and Financial Ontology. 21st IEEE Conference on Business Informatics. Moscow, Russian Federation 15 - 17 Jul 2019 IEEE . https://doi.org/10.1109/CBI.2019.00017

Intact Sample Analysis
Warford, A. and Volpi, E. 2019. Intact Sample Analysis. in: Warford, A. and Presneau, Nadège (ed.) Molecular Diagnostics Oxford University Press.

Enabled: Educational Network Amplifying Learning Experience (EnAbled)
Bolotov, A., Pierantoni, G., Chan You Fee, D., Wisudha, A. and Abduraimova, Z. 2018. Enabled: Educational Network Amplifying Learning Experience (EnAbled). Kensington Olimpia 12 Oct 2018

PO-018 Acquired DNA damage in adolescent obesity – a promoter and predictor of cancer?
Usman, M. and Volpi, E.V. 2018. PO-018 Acquired DNA damage in adolescent obesity – a promoter and predictor of cancer? ESMO Open. 3 (Supplement 2), pp. A27-A28. https://doi.org/10.1136/esmoopen-2018-eacr25.66

Tuning Natural Deduction Proof Search by Analytic Methods
Bolotov, A. and Gorchakov, A. 2018. Tuning Natural Deduction Proof Search by Analytic Methods. The 25th Workshop on Automated Reasoning: Bridging the Gap between Theory and Practice. University of Cambridge Apr 2018 University of Cambridge.

A tree-style one-pass tableau for an extension of ECTL+
Bolotov, A., Hermo, M. and Lucio, P. 2018. A tree-style one-pass tableau for an extension of ECTL+. The 25th Workshop on Automated Reasoning: Bridging the Gap between Theory and Practice. University of Cambridge Apr 2018 University of Cambridge.

EnAbled: A Psychology Profile based Academic Compass to Build and Navigate Students' Learning Paths
Bolotov, A., Pierantoni, G., Wisudha, A., Abduraimova, Z. and Chan You Fee, D. 2018. EnAbled: A Psychology Profile based Academic Compass to Build and Navigate Students' Learning Paths. EC-TEL Practitioner Proceedings 2018: 13th European Conference On Technology Enhanced Learning. Leeds, UK 03 - 06 Sep 2018 CEUR.

Extending fairness expressibility of ECTL+: a tree-style one-pass tableau approach
Bolotov, A., Hermo, M. and Lucio, P. 2018. Extending fairness expressibility of ECTL+: a tree-style one-pass tableau approach. 25th International Symposium on Temporal Representation and Reasoning, TIME-2018. Warsaw, Poland 15 - 17 Oct 2018 Schloss Dagstuhl - Leibniz-Zentrum fuer Informatik. https://doi.org/10.4230/LIPIcs.TIME.2018.5

In vivo modeling of human neuron dynamics and Down syndrome
Raquel Real, Manuel Peter, Antonio Trabalza, Shabana Khan, Mark Smith, Joana Dopp, Samuel Barnes, Ayiba Momoh, Alessio Strano, Volpi, E., Graham W Knott, F. J. Livesey and Vincenzo De Paola 2018. In vivo modeling of human neuron dynamics and Down syndrome. Apollo - University of Cambridge Repository. 362 (6416), p. eaau1810 eaau1810. https://doi.org/10.17863/cam.46476

Acquired DNA damage in adolescent obesity – a promoter and predictor of cancer?
Usman, M. and Volpi, E. 2018. Acquired DNA damage in adolescent obesity – a promoter and predictor of cancer? European Association for Cancer Research 25th Congress. Amsterdam 01 Jul 2018 European Society for Medical Oncology (ESMO). https://doi.org/10.1136/esmoopen-2018-EACR25.63

DNA damage in obesity: Initiator, promoter and predictor of cancer
Usman, M. and Volpi, E. 2018. DNA damage in obesity: Initiator, promoter and predictor of cancer. Mutation Research/Reviews in Mutation Research. 778, pp. 23-37. https://doi.org/10.1016/j.mrrev.2018.08.002

Enabled: Educational Network Amplifying Learning Experience (EnAbled)
Bolotov, A., Pierantoni, G., Wisudha, A., Abduraimova, Z. and Chan You Fee, D. 2018. Enabled: Educational Network Amplifying Learning Experience (EnAbled).

Paracomplete logic Kl: natural deduction, its automation, complexity and applications
Bolotov, A., Kozhemiachenko, D. and Shangin, V. 2018. Paracomplete logic Kl: natural deduction, its automation, complexity and applications. Journal of Applied Logics - IfCoLog Journal of Logics and their Applications. 5 (1), pp. 221-261.

Evaluation of oxidative DNA damage, genome instability and accelerated genomic ageing in childhood obesity
Usman, M. and Volpi, E. 2017. Evaluation of oxidative DNA damage, genome instability and accelerated genomic ageing in childhood obesity. The Human Genome in Healthcare - The Genetics Society. The Royal Society 23 - 24 Nov 2017

In situ hybridization: key concepts and applications
Warford, A. and Volpi, E. 2017. In situ hybridization: key concepts and applications. in: Orchard, G.R. and Nation, B. (ed.) Histopathology Oxford Oxford University Press. pp. 298-317

Evaluating Inflammatory and Genotoxic Consequences of Adiposity in Adolescents: a Non-Invasive Approach
Usman, M. and Volpi, E. 2017. Evaluating Inflammatory and Genotoxic Consequences of Adiposity in Adolescents: a Non-Invasive Approach. The 12th International Conference and 5th Asian Congress on Environmental Mutagens. Korea 12 - 16 Nov 2017 Korean Environmental Mutagen Society.

Genome Instability in Childhood Obesity – a potential role for bariatric surgery in cancer prevention?
Usman, M. and Volpi, E. 2017. Genome Instability in Childhood Obesity – a potential role for bariatric surgery in cancer prevention? Severe Paediatric Obesity: Current Medical and Surgical Management Paradigms - A Global Perspective. London 18 Jul 2017 International Consortium of Adolescent Bariatric Surgeons (ICABS).

On the Complexity of the Natural Deduction Proof Search Algorithm
Bolotov, A., Shangin, V. and Kozhemiachenko, D. 2017. On the Complexity of the Natural Deduction Proof Search Algorithm. ARW2017 - 24th Automated Reasoning Workshop. Bristol 03 - 04 Apr 2017 University of Bristol Technical Report.

Using virtual reality to prepare Bioscience students for practical classes
Coleman, S.K., Volpi, E. and Smith, C.L. 2017. Using virtual reality to prepare Bioscience students for practical classes. 16th Westminster Symposium Innovate!. University of Westminster, London 22 - 22 Jun 2017

Fluorescence in situ Hybridization (FISH): challenges and opportunities in the post-genomic era
Volpi, E. 2017. Fluorescence in situ Hybridization (FISH): challenges and opportunities in the post-genomic era. Applications of in situ hybridisation in research and disease. Cancer Research UK Cambridge Institute, Cambridge 17 - 18 May 2017

Whole genome analysis of a schistosomiasis-transmitting freshwater snail
Adema, C.M., Hillier, L.W., Jones, C.S., Loker, E.S., Knight, M., Minx, P., Oliveira, G., Raghavan, N., Shedlock, A., Rodrigues do Amaral, L., Arican-Goktas, H.D., Assis, A.G., Baba, E.H., Baron, O.L., Bayne, C.J., Bickham-Wright, U., Biggar, K.K., Blouin, M., Bonning, B.C., Botka, C., Bridger, J.M., Buckley, K.M., Buddenborg, S.K., Caldeira, R.L., Carleton, J., Carvalho, O.S., Castillo, M.G., Chalmers, I.W., Christensens, M., Clifton, S., Cosseau, C., Coustau, C., Cripps, R.M., Cuesta-Astroz, Y., Cummins, S.F., di Stephano, L., Dinguirard, N., Duval, D., Emrich, S., Feschotte, C., Feyereisen, R., FitzGerald, P., Fronick, C., Fulton, L., Galinier, R., Gave, S.G., Geusz, M., Geyer, K.K., Giraldo-Calderón, G.I., Gomes, M.D.S., Gordy, M.A., Gourbal, B., Grunau, C., Hanington, P.C., Hoffmann, K.F., Hughes, D., Humphries, J., Jackson, D.J., Jannotti-Passos, L.K., Jeremias, W.D.J., Jobling, S., Kamel, B., Kapusta, A., Kaur, S., Koene, J.M., Kohn, A.B., Lawson, D., Lawton, S.P., Liang, D., Limpanont, Y., Liu, S., Lockyer, A.E., Lovato, T.L., Ludolf, F., Magrini, V., McManus, D.P., Medina, M., Misra, M., Mitta, G., Mkoji, G.M., Montague, M.J., Montelongo, C., Moroz, L.L., Munoz-Torres, M.C., Niazi, U., Noble, L.R., Oliveira,, F.S., Pais, F.B., Papenfuss, A.T., Peace, R., Pena, J.J., Pila, E.A., Quelais, T., Raney, B.J., Rast, J.P., Rollinson, D., Rosse, I.C., Rotgans, B., Routledge, E.J., Ryan, K.M., Scholte, L.L.S., Storey, K.B., Swain, M., Tennessen, J.A., Tomlinson, C., Trujillo, D.L., Volpi, E., Walker, A.J., Wang, T., Wannaporn, I., Warren, W.C., Wu, X.J., Yoshino, T.P., Yusuf, M., Zhang, S.M., Zhao, M. and Wilson, R.K. 2017. Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nature Communications. 8, p. 15451 15451. https://doi.org/10.1038/ncomms15451

Genome instability in childhood obesity: A conceptual framework for an assessment, intervention and monitoring programme of inflammation and DNA damage in paediatric obesity
Usman, M., Tewfik, I. and Volpi, E. 2017. Genome instability in childhood obesity: A conceptual framework for an assessment, intervention and monitoring programme of inflammation and DNA damage in paediatric obesity. International Journal of Food, Nutrition and Public Health. 9 (1), pp. 1-12.

Formamide-free Fluorescence in situ Hybridization (FISH)
Volpi, E. 2017. Formamide-free Fluorescence in situ Hybridization (FISH). in: Liehr, T. (ed.) Fluorescence in situ Hybridization (FISH) - Application Guide Berlin Springer.

Towards Generalised Proof Search for Natural Deduction Systems for logics I⟨a;b⟩
Bolotov, A. and Shangin, V. 2016. Towards Generalised Proof Search for Natural Deduction Systems for logics I⟨a;b⟩. Hustadt, U. (ed.) Automated Reasoning Workshop 2016: Bridging the Gap between Theory and Practice (ARW 2016). Liverpool 19 - 20 May 2016 Automated Reasoning Workshop.

Discovering of System’s Invariants by Temporal Reasoning
Bolotov, A. 2016. Discovering of System’s Invariants by Temporal Reasoning. The International Conference on Innovations in Info-business and Technology (ICIIT). Colombo, Sri Lanka 04 - 04 Mar 2016 Informatics Institute of Technology.

Sensor Intelligence for Tackling Energy-Drain Attacks on Wireless Sensor Networks
Udoh, E., Getov, Vladimir and Bolotov, A. 2016. Sensor Intelligence for Tackling Energy-Drain Attacks on Wireless Sensor Networks. The 23rd Workshop on Automated Reasoning: Bridging the Gap between Theory and Practice. University of Liverpool 19 - 20 May 2016 Automated Reasoning Workshop.

Language impairment in a case of a complex chromosomal rearrangement with a breakpoint downstream of FOXP2
Moralli, D., Nudel, R., Chan, M.T.M., Green, C.M., Volpi, E., Benítez-Burraco, A., Newbury, D.F. and García-Bellido, P. 2015. Language impairment in a case of a complex chromosomal rearrangement with a breakpoint downstream of FOXP2 . Molecular Cytogenetics. 8 36. https://doi.org/10.1186/s13039-015-0148-1

Distributed Agent-Based Load Balancer for Cloud Computing
Sliwko, L., Getov, Vladimir and Bolotov, A. 2015. Distributed Agent-Based Load Balancer for Cloud Computing. The 22nd Workshop on Automated Reasoning: Bridging the Gap between Theory and Practice. University of Birmingham 09 Apr 2015 Automated Reasoning Workshop.

Nanofluidics to Enhance Single Molecule DNA Imaging: Detecting Genomic Structural Variation in Humans
David L.V. Bauer, Rodolphe M. Marie, Jonas N. Pedersen, Kristian H. Rasmussen, Mohammed Yusuf, Emanuela Volpi, Henrik Flyvbjerg, Anders Kristensen and Kalim U. Mir 2014. Nanofluidics to Enhance Single Molecule DNA Imaging: Detecting Genomic Structural Variation in Humans. Biophysical Journal. 106 (2, supplement 1), p. 395A. https://doi.org/10.1016/j.bpj.2013.11.2229

Socratic Proofs for Propositional Linear-Time Logic
Urbanski, M., Bolotov, A., Shangin, V. and Grigoriev, O. 2014. Socratic Proofs for Propositional Linear-Time Logic. Bolotov, A. (ed.) Joint Automated Reasoning Workshop and Deduktionstreffen. Vienna 23 - 24 Jul 2014 IJCAR.

Tackling Incomplete System Specifcations Using Natural Deduction in the Paracomplete Setting
Bolotov, A. and Shangin, V. 2014. Tackling Incomplete System Specifcations Using Natural Deduction in the Paracomplete Setting. COMPSAC 2014. Vasteras, Sweden Jul 2014 IEEE . https://doi.org/10.1109/COMPSAC.2014.15

Natural Deduction in a Paracomplete Setting
Bolotov, A. and Shangin, V. 2014. Natural Deduction in a Paracomplete Setting. Logical Investigations. 20, pp. 224-247.

Detailed phenotypic and genotypic characterization of bietti crystalline dystrophy
Halford, S., Liew, G., Mackay, D.S., Sergouniotis, P.I., Holt, R., Broadgate, S., Volpi, E., Ocaka, L., Robson, A.G., Holder, G.E., Moore, A.T., Michaelides, M. and Webster, A.R. 2014. Detailed phenotypic and genotypic characterization of bietti crystalline dystrophy. Ophtalmology. 121 (6), pp. 1174-1184. https://doi.org/10.1016/j.ophtha.2013.11.042

De novo and rare inherited mutations implicate the transcriptional coregulator TCF20/SPBP in autism spectrum disorder
Babbs, C., Lloyd, D., Pagnamenta, A.T., Twiggs, S.R., Green, J., McGowan, S.J., Mirza, G., Naples, R., Sharma, V.P., Volpi, E., Buckle, V.J., Wall, S.A., Knight SJ; International Molecular Genetic Study of Autism Consortium (IMGSAC), Parr, J.R. and Wilkie, A.O. 2014. De novo and rare inherited mutations implicate the transcriptional coregulator TCF20/SPBP in autism spectrum disorder. Journal of Medical Genetics. 51 (11), pp. 737-747. https://doi.org/10.1136/jmedgenet-2014-102582

Comparative study of artificial chromosome centromeres in human and murine cells
Moralli, D., Jefferson, A., Volpi, E. and Larin Monaco, Z. 2013. Comparative study of artificial chromosome centromeres in human and murine cells. European Journal of Human Genetics. 21, pp. 948-956. https://doi.org/10.1038/ejhg.2012.296

Fully Streched Single DNA Molecules in a Nanofluidic Chip Show Large-Scale Structural Variation
Jonas N. Pedersen, Rodolphe Marie, David L.V. Bauer, Kristian H. Rasmussen, Mohammed Yusuf, Emanuela V. Volpi, Anders Kristensen, Kalim U. Mir and Henrik Flyvbjerg 2013. Fully Streched Single DNA Molecules in a Nanofluidic Chip Show Large-Scale Structural Variation. Biophysical Journal. 104 (2, Supplement 1,), p. 175A. https://doi.org/10.1016/j.bpj.2012.11.986

Chromosomes and nuclear organisation in ICF syndrome
Volpi, E. 2013. Chromosomes and nuclear organisation in ICF syndrome. in: Yurov, Y.B., Vorsanova, S.G. and Iourov, I.Y. (ed.) Human interphase chromosomes: biomedical aspects New York Springer. pp. 107-121

Integrated view of genome structure and sequence of a single DNA molecule in a nanofluidic device.
Marie, R., Pedersen, J.N., Bauer, D.L., Rasmussen, K.H., Yusuf, M., Volpi, E., Flyvbjerg, H., Kristensen, A. and Mir, K.U. 2013. Integrated view of genome structure and sequence of a single DNA molecule in a nanofluidic device. Proceedings of the National Academy of Sciences of the United States of America. 110 (13), pp. 4893-4898. https://doi.org/10.1073/pnas.1214570110

Comprehensive cytogenomic profile of the in vitro neuronal model SH-SY5Y
Yusuf, M., Leung, K., Morris, K.J. and Volpi, E. 2013. Comprehensive cytogenomic profile of the in vitro neuronal model SH-SY5Y. Neurogenetics. 14 (1), pp. 63-70. https://doi.org/10.1007/s10048-012-0350-9

Natural deduction system in paraconsistent setting: proof search for PCont
Bolotov, A. and Shangin, V. 2012. Natural deduction system in paraconsistent setting: proof search for PCont. Journal of Intelligent Systems. 21 (1), pp. 1-24. https://doi.org/10.1515/jisys-2011-0021

Structures of lysenin reveal a shared evolutionary origin for pore-forming proteins and its mode of sphingomyelin recognition
De Colibus, L., Sonnen, A.F.-P., Morris, K.J., Siebert, C.A., Abrusci, P., Plitzko, J., Hodnik, V., Leippe, M., Volpi, E., Anderluh, G. and Gilbert, R.J.C. 2012. Structures of lysenin reveal a shared evolutionary origin for pore-forming proteins and its mode of sphingomyelin recognition. Structure. 20 (9), pp. P1498-1507. https://doi.org/10.1016/j.str.2012.06.011

High-resolution fish on DNA fibers for low-copy repeats genome architecture studies.
Molina, O., Blanco, J., Anton, E., Vidal, F. and Volpi, E.V. 2012. High-resolution fish on DNA fibers for low-copy repeats genome architecture studies. Genomics. 100 (6), pp. 380-386. https://doi.org/10.1016/j.ygeno.2012.08.007

A family with autism and rare copy number variants disrupting the Duchenne/Becker muscular dystrophy gene DMD and TRPM3
Pagnamenta, A.T., Holt, R., Yusuf, M., Pinto, D., Wing, K., Betancur, C., Scherer, S.W., Volpi, E.V. and Monaco, A.P. 2011. A family with autism and rare copy number variants disrupting the Duchenne/Becker muscular dystrophy gene DMD and TRPM3. Journal of Neurodevelopmental Disorders. 3, pp. 124-131. https://doi.org/10.1007/s11689-011-9076-5

Characterization of a dominant cone degeneration in a green fluorescent protein-reporter mouse with disruption of Loci associated with human dominant retinal dystrophy.
Lipinski, D.M., Yusuf, M., Barnard, A.R., Damant, C., Charbel Issa, P., Singh, M.S., Lee, E., Davies, W.L., Volpi, E.V. and MacLaren R.E. 2011. Characterization of a dominant cone degeneration in a green fluorescent protein-reporter mouse with disruption of Loci associated with human dominant retinal dystrophy. Investigative Ophthalmology & Visual Science. 52 (9), pp. 6617-6623. https://doi.org/10.1167/iovs.11-7932

Perforin activity at membranes leads to invaginations and vesicle formation
Praper, T., Sonnen, A.F., Kladnik, A., Andrighetti, A.O., Viero, G., Morris, K.J., Volpi, E.V., Lunelli, L., Dalla Serra, M., Froelich, C.J., Gilbert, R.J. and Anderluh, G. 2011. Perforin activity at membranes leads to invaginations and vesicle formation. Proceedings of the National Academy of Sciences of the United States of America. 108 (52). https://doi.org/10.1073/pnas.1107473108

Combining M-FISH and Quantum Dot technology for fast chromosomal assignment of transgenic insertions
Yusuf, M., Bauer, D.L.V., Lipinski, D.M., MacLaren, R.E., Wade-Martins, R., Mir, K.U. and Volpi, E. 2011. Combining M-FISH and Quantum Dot technology for fast chromosomal assignment of transgenic insertions. BMC Biotechnology. 11, pp. 121-131. https://doi.org/10.1186/1472-6750-11-121

Natural deduction system in paraconsistent setting: proof search for PCont
Bolotov, A. and Shangin, V. 2011. Natural deduction system in paraconsistent setting: proof search for PCont. In the Proceedings of the 5th Indian International Conference on Artificial Intelligence (IICAI-2011). Tumkur, Karnataka State, India 14th - 16th December 2011 pp. 630-638

Natural deduction in the setting of paraconsistent logic
Bolotov, A. 2011. Natural deduction in the setting of paraconsistent logic. 18th Automated Reasoning Workshop 2011 (ARW2011). University of Glasgow 11th - 12th April 2011

Handling periodic properties: deductive verification for quantified temporal logic specifications
Bolotov, A. 2011. Handling periodic properties: deductive verification for quantified temporal logic specifications. in: 2011 5th international conference on secure software integration and reliability improvement companion IEEE . pp. 179-186

An improved technique for chromosomal analysis of human ES and iPS cells.
Moralli, D., Yusuf, M., Mandegar, M.A., Khoja, S., Monaco, Z.L. and Volpi, E.V. 2011. An improved technique for chromosomal analysis of human ES and iPS cells. Stem Cell Reviews. 7 (2), pp. 471-477. https://doi.org/10.1007/s12015-010-9224-4

Functional human artificial chromosomes are generated and stably maintained in human embryonic stem cells
Mandegar, M.A., Moralli, D., Khoja, S., Cowley, S., Chan, D.Y.L., Yusuf, M., Mukherjee, S., Blundell, M.P., Volpi, E., Thrasher, A.J., James, W. and Monaco, Z.L. 2011. Functional human artificial chromosomes are generated and stably maintained in human embryonic stem cells. Human Molecular Genetics. 20 (15), pp. 2905-2913. https://doi.org/10.1093/hmg/ddr144

Fluorescence in situ hybridization (FISH) for genomic investigations in rat
Jefferson, A. and Volpi, E.V. 2010. Fluorescence in situ hybridization (FISH) for genomic investigations in rat. in: Bridger, J. and Volpi, E. (ed.) Fluorescence in situ Hybridization (FISH). Methods in Molecular Biology (Methods and Protocols), vol 659 Humana Press. pp. 409-426

A novel three-dimensional culture system allows prolonged culture of functional human granulosa cells and mimics the ovarian environment.
Kossowska-Tomaszczuk, K., Pelczar, P., Güven, S., Kowalski, J., Volpi, E., De Geyter, C. and Scherberich, A. 2010. A novel three-dimensional culture system allows prolonged culture of functional human granulosa cells and mimics the ovarian environment. Tissue Engineering Part A. 16 (6), pp. 2063-73. https://doi.org/10.1089/ten.tea.2009.0684

Expression profiling in progressive stages of fumarate-hydratase deficiency: the contribution of metabolic changes to tumorigenesis.
Ashrafian, H., O'Flaherty, L., Adam, J., Steeples, V., Chung, Y.L., East, P., Vanharanta, S., Lehtonen, H., Nye, E., Hatipoglu, E., Miranda, M., Howarth, K., Shukla, D., Pollard, P.J. and Volpi, E. 2010. Expression profiling in progressive stages of fumarate-hydratase deficiency: the contribution of metabolic changes to tumorigenesis. Cancer Research. 70 (22), pp. 9153-9165. https://doi.org/10.1158/0008-5472.can-10-1949

Safety and liveness of component-oriented protocols: a feasibility study
Paurobally, S., Bolotov, A. and Getov, Vladimir 2010. Safety and liveness of component-oriented protocols: a feasibility study. in: Bolotov, A. (ed.) Proceedings of the automated reasoning workshop 2010: bridging the gap between theory and practice. ARW 2010 University of Westminster.

Altered intra-nuclear organisation of heterochromatin and genes in ICF syndrome.
Jefferson, A., Colella, S., Moralli, D., Wilson, N., Yusuf, M., Gimelli, G., Ragoussis, J. and Volpi, E.V. 2010. Altered intra-nuclear organisation of heterochromatin and genes in ICF syndrome. PLoS ONE. 5 (6) e11364. https://doi.org/10.1371/journal.pone.0011364

Towards symbolic reasoning from subsymbolic sensory information
Bolotov, A., Gupta, G. and Psarrou, A. 2010. Towards symbolic reasoning from subsymbolic sensory information. in: Bolotov, A. (ed.) Proceedings of the automated reasoning workshop 2010: bridging the gap between theory and practice. ARW 2010 University of Westminster.

Invariant-free deduction for CTL*: the tableau method
Bolotov, A., Gaintzarain, J. and Lucio, P. 2010. Invariant-free deduction for CTL*: the tableau method. in: Bolotov, A. (ed.) Proceedings of the automated reasoning workshop 2010: bridging the gap between theory and practice. ARW 2010 University of Westminster.

Mapping of partially overlapping de novo deletions across an autism susceptibility region (AUTS5) in two unrelated individuals affected by developmental delays with communication impairment.
Newbury, D.F., Warburton, P.C., Wilson, N., Bacchelli, E., Carone, S., International Molecular Genetic Study of Autism Consortium, Lamb, J.A., Maestrini, E., Monaco, A.P. and Volpi, E. 2009. Mapping of partially overlapping de novo deletions across an autism susceptibility region (AUTS5) in two unrelated individuals affected by developmental delays with communication impairment. American Journal of Medical Genetics Part A. 149A (4), pp. 588-597. https://doi.org/10.1002/ajmg.a.32704

HAC stability in murine cells is influenced by nuclear localization and chromatin organization.
Moralli, D., Chan, D.Y., Jefferson, A., Volpi, E.V. and Monaco, Z.L. 2009. HAC stability in murine cells is influenced by nuclear localization and chromatin organization. BMC Cell Biology. 10 18. https://doi.org/10.1186/1471-2121-10-18

Copy number variation and association analysis of SHANK3 as a candidate gene for autism in the IMGSAC collection.
Sykes, N.H., Toma, C., Wilson, N., Volpi, E., Sousa, I., Pagnamenta, A.T., Tancredi, R., Battaglia, A., Maestrini, E., Bailey, A.J., Monaco, A.P. and International Molecular Genetic Study of Autism Consortium (IMGSAC) 2009. Copy number variation and association analysis of SHANK3 as a candidate gene for autism in the IMGSAC collection. European Journal of Human Genetics. 17, pp. 1347-1353. https://doi.org/10.1038/ejhg.2009.47

Severe insulin resistance and intrauterine growth deficiency associated with haploin sufficiency for INSR and CHN2: new insights into synergistic pathways involved in growth and metabolism
Suliman, S.G., Stanik, J., McCulloch, L.J., Wilson, N., Edghill, E.L., Misovicova, N., Gasperikova, D., Sandrikova, V., Elliott, K.S., Barak, L., Ellard, S., Volpi, E.V., Klimes, I. and Gloyn, A.L. 2009. Severe insulin resistance and intrauterine growth deficiency associated with haploin sufficiency for INSR and CHN2: new insights into synergistic pathways involved in growth and metabolism. Diabetes. 58 (12), pp. 2954-2961. https://doi.org/10.2337/db09-0787

Multi-agent systems as instrumentation tools for e-business and e-society
Bolotov, A. and Maltseva, S. 2009. Multi-agent systems as instrumentation tools for e-business and e-society. Russian Internet Week. Moscow, Russia December 2009

Natural deduction calculus for quantified propositional linear-time temporal logic (QPTL)
Bolotov, A. and Grigoriev, O. 2009. Natural deduction calculus for quantified propositional linear-time temporal logic (QPTL). in: Hustadt, U. (ed.) Proceedings of the Automated Reasoning Workshop 2009: bridging the gap between theory and practice (ARW 2009), 21st - 22nd April 2009, , Liverpool, United Kingdom University of Liverpool Department of Computer Science.

Natural deduction calculus for quantified propositional linear-time temporal logic
Bolotov, A. and Grigoriev, O. 2009. Natural deduction calculus for quantified propositional linear-time temporal logic. University of Westminster.

Combining computation tree logic and deontic logic in natural deduction style calculus
Bolotov, A. and Grigoriev, O. 2009. Combining computation tree logic and deontic logic in natural deduction style calculus. University of Westminster.

Deontic extension of deductive verification of component model: combining computation tree logic and deontic logic in natural deduction style calculus
Bolotov, A., Basso, A. and Grigoriev, O. 2009. Deontic extension of deductive verification of component model: combining computation tree logic and deontic logic in natural deduction style calculus. in: Proceedings of the 4th Indian International Conference on Artificial Intelligence (IICAI-09), December 16-18, 2009, SIT, Tumkur, India IICAI. pp. 166-185

On the "until induction" in natural deduction for PLTL
Bolotov, A. 2009. On the "until induction" in natural deduction for PLTL. in: International conference "6th Smirnov's Readings in Logic" June 17-19, 2009, Moscow, Russia Faculty of Philosophy, Lomonosov Moscow State University.

Temporal specification and deductive verification of a distributed component model and its environment
Basso, A., Bolotov, A. and Getov, Vladimir 2009. Temporal specification and deductive verification of a distributed component model and its environment. in: Proceedings of the Third IEEE International Conference on Secure Software Integration and Reliability Improvement, 2009 (SSIRI 2009) IEEE . pp. 379-386

State-based behavior specification for GCM systems
Basso, A., Bolotov, A. and Getov, Vladimir 2009. State-based behavior specification for GCM systems. in: Hustadt, U. (ed.) Proceedings of the utomated Reasoning Workshop 2009: bridging the gap between theory and practice (ARW 2009), 21st - 22nd April 2009, , Liverpool, United Kingdon University of Liverpool Department of Computer Science.

Dynamic reconfiguration of GCM components
Basso, A., Bolotov, A., Getov, Vladimir and Henrio, L. 2008. Dynamic reconfiguration of GCM components. CoreGRID. https://doi.org/CoreGRIDTechnicalReportNumberTR-0173

FISH glossary: an overview of the fluorescence in situ hybridization technique.
Volpi, E.V. and Bridger, J.M. 2008. FISH glossary: an overview of the fluorescence in situ hybridization technique. BioTechniques. 45 (4), pp. 385-409. https://doi.org/10.2144/000112811

Automating natural deduction for temporal logic
Bolotov, A., Grigoriev, O. and Shangin, V. 2008. Automating natural deduction for temporal logic. in: Glymour, C., Wang, W. and Westerstahl, D. (ed.) Proceedings of the 13th International Congress of Logic Methodology and Philosophy of Science King's College Publications.

Natural deduction system for linear time temporal logic
Bolotov, A., Basukoski, A., Gregoryev, O. and Shangin, V. 2008. Natural deduction system for linear time temporal logic. in: Logical Investigations Moscow Nauka.

Tackling ”until induction” in natural deduction for PLTL
Bolotov, A. 2008. Tackling ”until induction” in natural deduction for PLTL. in: Dennis, L.A. and Sorge, V. (ed.) Proceedings of the automated reasoning workshop 2008 University of Birmingham. pp. 12-13

Tackling "until induction" in natural deduction for PLTL
Bolotov, A. 2008. Tackling "until induction" in natural deduction for PLTL. in: Proceedings of the 15th workshop on automated reasoning: bridging the gap between theory and practice: CICM 2008, Conferences on Intelligent Computer Mathematics, University of Birmingham, UK Birmingham School of Computer Science.

Behavioural model of component-based Grid environments
Basso, A., Bolotov, A. and Getov, Vladimir 2008. Behavioural model of component-based Grid environments. in: Priol, T. and Vanneschi, M. (ed.) From grids to service and pervasive computing Springer. pp. 19-30

Automata-based formal specification of stateful systems
Basso, A., Bolotov, A. and Getov, Vladimir 2008. Automata-based formal specification of stateful systems. in: Dennis, L.A. and Sorge, V. (ed.) Proceedings of the automated reasoning workshop 2008 University of Birmingham. pp. 6-7

Automata based formal specification of stateful systems
Basso, A., Bolotov, A. and Getov, Vladimir 2008. Automata based formal specification of stateful systems. in: Proceedings of the 15th workshop on automated reasoning: bridging the gap between theory and practice: CICM 2008, Conferences on Intelligent Computer Mathematics, University of Birmingham, UK Birmingham School of Computer Science.

Towards GCM re-configuration – extending specification by norm
Basso, A. and Bolotov, A. 2008. Towards GCM re-configuration – extending specification by norm. in: Danelutto, M., Fragopoulou, P. and Getov, Vladimir (ed.) Making grids work: Proceedings of the CoreGRID Workshop on Programming Models Grid and P2P System Architecture Grid Systems, Tools and Environments 12-13 June 2007, Heraklion, Crete, Greece New York, NY, USA Springer. pp. 17-29

Endothelial Nox2 overexpression potentiates vascular oxidative stress and hemodynamic response to angiotensin II: studies in endothelial-targeted Nox2 transgenic mice.
Bendall, J.K., Rinze, R., Adlam, D., Tatham, A.L., de Bono, J., Wilson, N., Volpi, E. and Channon, K.M. 2007. Endothelial Nox2 overexpression potentiates vascular oxidative stress and hemodynamic response to angiotensin II: studies in endothelial-targeted Nox2 transgenic mice. Circulation Research. 100, pp. 1016-1025. https://doi.org/10.1161/01.res.0000263381.83835.7b

Replication profile of PCDH11X and PCDH11Y, a gene pair located in the non-pseudoautosomal homologous region Xq21.3/Yp11.2.
Wilson, N.D., Ross, L.J., Close, J., Mott, R., Crow, T.J. and Volpi, E.V. 2007. Replication profile of PCDH11X and PCDH11Y, a gene pair located in the non-pseudoautosomal homologous region Xq21.3/Yp11.2. Chromosome Research. 15, pp. 485-498. https://doi.org/10.1007/s10577-007-1153-y

Search for neuroblastoma loci: characterization of tumor cell lines that could facilitate their positional cloning.
Romani, M., Muresu, R., Volpi, E.V., Rozzo, C., Marchi, J.M. and Casciano, I. 2007. Search for neuroblastoma loci: characterization of tumor cell lines that could facilitate their positional cloning. Journal of Neuro-oncology . 31, pp. 41-47. https://doi.org/10.1023/a:1005725112688

A Simpler formulation of natural deduction calculus for linear-time temporal logic
Bolotov, A., Grigoriev, O. and Shangin, V. 2007. A Simpler formulation of natural deduction calculus for linear-time temporal logic. in: Bhanu, P. (ed.) Proceedings of the 3rd Indian International Conference on Artificial Intelligence, Pune, India, December 17-19, 2007. IICAI 2007 India IICAI. pp. 1253-1266

Buy one get two free: a simpler formulation of natural deduction for computation tree logic CTL
Bolotov, A., Grigoriev, O. and Shangin, V. 2007. Buy one get two free: a simpler formulation of natural deduction for computation tree logic CTL. in: Proceedings of the "Smirnov's Readings", VI International Conference (in Russian) Moscow, Russia Moscow State University.

Automating natural deduction for linear-time temporal logic
Bolotov, A., Grigoriev, O. and Shangin, V. 2007. Automating natural deduction for linear-time temporal logic. in: 14th International Symposium on Temporal Representation and Reasoning (TIME'07)), 28-30 June 2007, Alicante, Spain Los Alamitos, USA IEEE . pp. 47-58

Automating natural deduction for temporal logic
Bolotov, A., Grigoriev, O. and Shangin, V. 2007. Automating natural deduction for temporal logic. in: Proceedings of the 14th Workshop on Automated Reasoning: Bridging the Gap between Theory and Practice, ARW 2007. London Imperial College.

A clausal resolution method for extended computation tree logic ECTL
Bolotov, A. and Basukoski, A. 2006. A clausal resolution method for extended computation tree logic ECTL. Journal of Applied Logic. 4 (2), pp. 141-167. https://doi.org/10.1016/j.jal.2005.06.003

Specification and verification of reconfiguration protocols in grid component systems
Basso, A., Bolotov, A., Basukoski, A., Getov, Vladimir, Henrio, L. and Urbanski, M. 2006. Specification and verification of reconfiguration protocols in grid component systems. CoreGRID. https://doi.org/CoreGRIDTechnicalReportNumberTR-0042

A clausal resolution method for branching-time logic ECTL+
Bolotov, A. and Basukoski, A. 2006. A clausal resolution method for branching-time logic ECTL+. Annals of Mathematics and Artificial Intelligence. 46 (3), pp. 235-263. https://doi.org/10.1007/s10472-006-9018-1

PCDH11 is X/Y homologous in Homo sapiens but not in Gorilla gorilla and Pan troglodytes.
Wilson, N.D., Ross, L.J., Crow, T.J. and Volpi, E.V. 2006. PCDH11 is X/Y homologous in Homo sapiens but not in Gorilla gorilla and Pan troglodytes. Cytogenetic and Genome Research. 114, pp. 137-139. https://doi.org/10.1159/000093329

The leukocyte receptor complex in chicken is characterized by massive expansion and diversification of immunoglobulin-like Loci.
Laun, K., Coggill, P., Palmer, S., Sims, S., Ning, Z., Ragoussis, J., Volpi, E., Wilson, N., Beck, S., Ziegler, A. and Volz, A. 2006. The leukocyte receptor complex in chicken is characterized by massive expansion and diversification of immunoglobulin-like Loci. PLoS Genetics. 2 (5) e73. https://doi.org/10.1371/journal.pgen.0020073

Specification and Verification of Reconfiguration Protocols in Grid Component Systems
Bolotov, A., Getov, Vladimir, Basso, A. and Basukoski, A. 2006. Specification and Verification of Reconfiguration Protocols in Grid Component Systems. Proceedings of the Workshop on Automated Reasoning: Bridging the Gap between Theory and Practice. London 30 - 31 Mar 2010 University of Bristol Technical Report.

Search and Check: problem solving by problem reduction
Bolotov, A., Lupkowski, P. and Urbanski, M. 2006. Search and Check: problem solving by problem reduction. in: Artificial Intelligence and Soft Computing ICAISC 2006: 8th International Conference, Zakopane, Poland, June 25-29, 2006, Proceedings Polish Neural Networks Society.

Natural deduction calculus for computation tree logic
Bolotov, A., Grigoriev, O. and Shangin, V. 2006. Natural deduction calculus for computation tree logic. in: IEEE John Vincent Atanasoff 2006 International Symposium on Modern Computing (JVA'06) Los Alamitos, USA IEEE . pp. 175-183

Natural deduction calculus for linear-time temporal logic
Bolotov, A., Basukoski, A., Grigoriev, O. and Shangin, V. 2006. Natural deduction calculus for linear-time temporal logic. in: Fisher, M., van der Hoek, W., Konev, B. and Lisitsa, A. (ed.) Logics in artificial intelligence: 10th European conference, JELIA 2006: Liverpool, UK September 13-15 2006: proceedings Berlin, Germany Springer.

Specification and verification of reconfiguration protocols in grid component systems
Basso, A., Bolotov, A., Basukoski, A., Getov, Vladimir, Henrio, L. and Urbanski, M. 2006. Specification and verification of reconfiguration protocols in grid component systems. in: Proceedings of the 3rd IEEE International Conference on Intelligent Systems (IS-2006) Los Alamitos, USA IEEE . pp. 450-455

Alternating automata and temporal logic normal forms
Dixon, C., Bolotov, A. and Fisher, M. 2005. Alternating automata and temporal logic normal forms. Annals of Pure and Applied Logic. 135 (1-3), pp. 263-285. https://doi.org/10.1016/j.apal.2005.03.002

An interstitial deletion-insertion involving chromosomes 2p25.3 and Xq27.1, near SOX3, causes X-linked recessive hypoparathyroidism.
Bowl, M.R., Nesbit, M.A., Harding, B., Levy, E., Jefferson, A., Volpi, E.V., Rizzoti, K., Lovell-Badge, R., Schlessinger, D., Whyte, M.P. and Thakker, R.V. 2005. An interstitial deletion-insertion involving chromosomes 2p25.3 and Xq27.1, near SOX3, causes X-linked recessive hypoparathyroidism. Journal of Clinical Investigation. 115 (10), pp. 2822-2831. https://doi.org/10.1172/jci24156

Normative agents: formal analysis and applications
Bolotov, A. and Svigkos, I. 2005. Normative agents: formal analysis and applications. in: Proceedings of the International Conference Business at the Heart of Central Asia: Critical Issues of Competition and Competitiveness Westminster International University in Tashkent.

Proof-searching algorithm in first order classical natural deduction calculus
Bolotov, A., Bocharov, V., Gorchakov, A. and Shangin, V. 2005. Proof-searching algorithm in first order classical natural deduction calculus. in: Hajek, P., Valdes-Villanueva, L. and Westerstahl, D. (ed.) Logic, methodology and philosophy of science: proceedings of the twelfth international congress King's College Publications.

Automated first order natural deduction
Bolotov, A., Bocharov, V., Gorchakov, A. and Shangin, V. 2005. Automated first order natural deduction. in: Prasad, B. (ed.) Proceedings of the 2nd Indian International Conference on Artificial Intelligence, Pune, India, December 20-22, 2005. IICAI 2005 ISCAI. pp. 1292-1311

Search strategies for resolution in CTL-type logics: extension and complexity
Basukoski, A. and Bolotov, A. 2005. Search strategies for resolution in CTL-type logics: extension and complexity. in: 12th International Symposium on Temporal Representation and Reasoning, 2005: TIME 2005 Los Alamitos, USA IEEE . pp. 195-197

Unexpected complexity in the haplotypes of commonly used inbred strains of laboratory mice
Yalcin, B., Fullerton, J., Miller, S., Keays, D.A., Brady, S., Bhomra, A., Jefferson, A., Volpi, E., Copley, R.R., Flint, J. and Mott, R. 2004. Unexpected complexity in the haplotypes of commonly used inbred strains of laboratory mice. Proceedings of the National Academy of Sciences of the United States of America. https://doi.org/10.1073/pnas.0401189101

Mapping of three translocation breakpoints associated with orofacial clefting within 6p24 and identification of new transcripts within the region
Davies, S.J., Wise, C., Venkatesh, B., Mirza, G., Jefferson, A., Volpi, E.V. and Ragoussis, J. 2004. Mapping of three translocation breakpoints associated with orofacial clefting within 6p24 and identification of new transcripts within the region. Cytogenetic and Genome Research. 105, pp. 47-53. https://doi.org/10.1159/000078008

Let the computer prove it
Bolotov, A., Bocharov, V., Gorchakov, A., Makarov, V. and Shangin, V. 2004. Let the computer prove it. Moscow, Russia Nauka.

A clausal resolution method for branching-time logic ECTL+
Bolotov, A. and Basukoski, A. 2004. A clausal resolution method for branching-time logic ECTL+. in: Combi, C. (ed.) 11th International Symposium on Temporal Representation and Reasoning: (TIME 2004), Tatihou, Normandie, France, 1-3 July 2004 IEEE . pp. 140-147

The relationship between Temporal Logic, Normal Form and Alternating Automata
Dixon, C., Bolotov, A. and Fisher, M. 2003. The relationship between Temporal Logic, Normal Form and Alternating Automata. Proceedings of the Workshop on Automated Reasoning: Bridging the Gap between Theory and Practice. London 30 - 31 Mar 2010

A clausal resolution for extended computation tree logic ECTL
Bolotov, A. 2003. A clausal resolution for extended computation tree logic ECTL. in: Reynolds, M. and Sattar, A. (ed.) Proceedings of the Combined Tenth International Symposium on Temporal Representation and Reasoning and the Fourth International Conference on Temporal Logic: TIME-ICTL 2003 Cairns, Queensland, Australia, 8-10 July 2003 USA IEEE . pp. 107-117

On the relationship between w-automata and temporal logic normal forms
Bolotov, A., Fisher, M. and Dixon, C. 2002. On the relationship between w-automata and temporal logic normal forms. Journal of Logic and Computation. 12 (4), pp. 561-581. https://doi.org/10.1093/logcom/12.4.561

Clausal resolution in a logic of rational agency
Dixon, C., Fisher, M. and Bolotov, A. 2002. Clausal resolution in a logic of rational agency. Artificial Intelligence: an international journal. 139 (1), pp. 47-89. https://doi.org/10.1016/S0004-3702(02)00196-0

Towards Automated Generation of Beliefs in BDI Logics.
Basukoski, A. and Bolotov, A. 2002. Towards Automated Generation of Beliefs in BDI Logics. Automated Reasoning Workshop ARW2002. Imperial College, London Imperial College.

Towards Automated Generation of Beliefs in BDI Logics
Basukoski, A. and Bolotov, A. 2002. Towards Automated Generation of Beliefs in BDI Logics. UK Automated Reasoning Workshop (ARW). Imperial College.

Cohesion, but not too close
Volpi, E.V., Sheer, D. and Uhlmann, F. 2001. Cohesion, but not too close. Current Biology. 11 (10), p. R378. https://doi.org/10.1016/s0960-9822(01)00212-3

Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei.
Volpi, E.V., Chevret, E., Jones, T., Vatcheva, R., Williamson, J., Beck, S., Campbell, R.D., Goldsworthy, M., Powis, S.H., Ragoussis, J., Trowsdale, J. and Sheer, D. 2000. Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei. Journal of Cell Science. 113 (Pt 9), pp. 1565-1576. https://doi.org/10.1242/jcs.113.9.1565

Mini review: form and function in the human interphase chromosome
Chevret, E., Volpi, E.V. and Sheer, D. 2000. Mini review: form and function in the human interphase chromosome. Cytogenetics and Cell Genetics. 90 (1-2), pp. 13-21. https://doi.org/10.1159/000015654

Nucleotide sequence and chromosomal mapping of the 5S rDNA repeat of the crustacean Proasellus coxalis.
Pelliccia, F., Barzotti, R., Volpi, E.V., Bucciarelli, E. and Rocchi, A. 1998. Nucleotide sequence and chromosomal mapping of the 5S rDNA repeat of the crustacean Proasellus coxalis. Genome. 41 (1), pp. 129-123. https://doi.org/10.1139/g97-110

Numerical abnormalities of chromosomes 1 and 10 in endometrial adenocarcinoma: fluorescence in situ hybridization analysis of 23 archival paraffin-embedded samples.
Muresu, R., Cossu, A., Scarpa, A.M., Volpi, E.V., Rocca, P.C., Pintus, A., Tibiletti, M.G., Tanda, F., Pirastu, M. and Massarelli, G. 1998. Numerical abnormalities of chromosomes 1 and 10 in endometrial adenocarcinoma: fluorescence in situ hybridization analysis of 23 archival paraffin-embedded samples. Cancer Genetics and Cytogenetics. 107 (1), pp. 37-42. https://doi.org/10.1016/s0165-4608(98)00059-4

An integrated physical and genetic map spanning chromosome band 10q24.
Gray, I.C., Fallowfield, J., Ford, S., Nobile, C., Volpi, E.V. and Spurr, N.K. 1997. An integrated physical and genetic map spanning chromosome band 10q24. Genomics. 43 (1), pp. 85-88. https://doi.org/10.1006/geno.1997.4809

Detailed physical analysis of a 1.5-megabase YAC contig containing the MXI1 and ADRA2A genes.
Manca, A., Volpi, E.V., Laficara, F., Muresu, R., Gray, I.C., Spurr, N.K. and Nobile, C. 1997. Detailed physical analysis of a 1.5-megabase YAC contig containing the MXI1 and ADRA2A genes. Genomics. 45 (2), pp. 407-411. https://doi.org/10.1006/geno.1997.4924

Taxonomic and biogeographic analysis of the Proasellus coxalis-group (Crustacea, Isopoda, Asellidae) in Sicily, with description of Proasellus montalentii n.sp.
Stoch, F., Valentino, F. and Volpi, E. 1996. Taxonomic and biogeographic analysis of the Proasellus coxalis-group (Crustacea, Isopoda, Asellidae) in Sicily, with description of Proasellus montalentii n.sp. Hydrobiologia. 317, pp. 247-258. https://doi.org/10.1007/bf00036474

More detailed characterization of some of the HL60 karyotypic features by fluorescence in situ hybridization.
Volpi, E.V., Vatcheva, R., Labella, T. and Gan, S.U. 1996. More detailed characterization of some of the HL60 karyotypic features by fluorescence in situ hybridization. Cancer Genetics and Cytogenetics. 87 (2), pp. 103-106. https://doi.org/10.1016/0165-4608(95)00214-6

Molecular and genetic studies on the region of translocation and duplication in the neuroblastoma cell line NGP at the 1p36.13-p36.32 chromosomal site
Casciano, I., Marchi, J.V.M., Muresu, R., Volpi, E.V., Rozzo, C., Opdenakker, G. and Romani, M. 1996. Molecular and genetic studies on the region of translocation and duplication in the neuroblastoma cell line NGP at the 1p36.13-p36.32 chromosomal site. Oncogene. 12 (10), pp. 2101-2108.

Simple DNA repeats and sex chromosome differentiation in asellus aquaticus (Crustacea, isopoda)
Volpi, E.V., Pelliccia, F., Lanza, V., Barzotti, R. and Rocchi, A. 1995. Simple DNA repeats and sex chromosome differentiation in asellus aquaticus (Crustacea, isopoda). Heredity. 75, p. 267–272. https://doi.org/10.1038/hdy.1995.134

Cytogenetic and molecular studies on the neuroblastoma cell line NGP: identification of a reciprocal t(1;15) involving the "consensus region" 1p36.1.
Muresu, R., Casciano I., Volpi, E.V., Siniscalco, M. and Romani, M. 1995. Cytogenetic and molecular studies on the neuroblastoma cell line NGP: identification of a reciprocal t(1;15) involving the "consensus region" 1p36.1. Genes, Chromosomes & Cancer. 13 (1), pp. 66-71. https://doi.org/10.1002/gcc.2870130111

Subregional mapping of the human lymphocyte-specific protein tyrosine kinase gene (LCK) to 1p35-->p34.3 and its position relative to the 1p marker D1S57.
Volpi, E.V., Romani, M. and Siniscalco, M. 1994. Subregional mapping of the human lymphocyte-specific protein tyrosine kinase gene (LCK) to 1p35-->p34.3 and its position relative to the 1p marker D1S57. Cytogenetics and Cell Genetics. 67, pp. 187-189. https://doi.org/10.1159/000133819

Telomeric sequences of ase/lus aquaticus (Crust. isop.)
Pelliccia, F., Volpi, E.V., Lanza, V., Gaddini, L., Balding, A. and Rocchi, A. 1994. Telomeric sequences of ase/lus aquaticus (Crust. isop.). Heredity. 72, pp. 78-80. https://doi.org/10.1038/hdy.1994.9

Concurrent mapping of an adenovirus 5/SV40 integration site and the U1 snRNA cluster (RNU1) within 400 kb of the chromosome region 1p36.1.
Romani, M., Baldini, A., Volpi, E., Casciano, I., Nobile, C., Muresu, R. and Siniscalco, M. 1994. Concurrent mapping of an adenovirus 5/SV40 integration site and the U1 snRNA cluster (RNU1) within 400 kb of the chromosome region 1p36.1. Cytogenetics and Cell Genetics. 67, pp. 37-40. https://doi.org/10.1159/000133793

MULTIPRINS: a method for multicolour primed in situ labelling
Volpi, E. and Baldini, A. 1993. MULTIPRINS: a method for multicolour primed in situ labelling. Chromosome Research. 1, pp. 257-260. https://doi.org/10.1007/bf00710131

The scientist and his time
Bolotov, A. and Zaitzev, D. 1993. The scientist and his time. Moscow University Bulletin. 5, pp. 1-12.

Morphological differentiation of a sex chromosome and ribosomal genes in asellus aquaticus (Crust. Isop.)
Volpi, E.V., Pelliccia, F., Lanza, V., Di Castro, M. and Rocchi, A. 1992. Morphological differentiation of a sex chromosome and ribosomal genes in asellus aquaticus (Crust. Isop.). Heredity. https://doi.org/10.1038/hdy.1992.153

GATA repeats in the genome of Asellus aquaticus (Crustacea, Isopoda).
Pelliccia, F., Di Castro, M., Lanza, V., Volpi, E.V. and Rocchi, A. 1991. GATA repeats in the genome of Asellus aquaticus (Crustacea, Isopoda). Chromosoma. 100, pp. 152-155. https://doi.org/10.1007/bf00337243

Light-dark cycle and mitotic index in Asellus aquaticus (L.) (Crustacea, Isopoda)
Valentino, F., Volpi, E.V., Antolini, R. and Migliore, L. 1990. Light-dark cycle and mitotic index in Asellus aquaticus (L.) (Crustacea, Isopoda). Genetica. 82, pp. 147-150. https://doi.org/10.1007/bf00124645

The genetic isolation between some populations of Proasellus coxalis
Volpi, E.V., Antolini, R. and Valentino, F. 1989. The genetic isolation between some populations of Proasellus coxalis. Journal of Zoological Systematics and Evolutionary Research. 27 (3), pp. 246-251. https://doi.org/10.1111/j.1439-0469.1989.tb00346.x

Characterization of the karyotype of proasellus meridianusby differential staining techniques
Di Castro, M., Lanza, V., Volpi, E.V. and Rocchi, A. 1989. Characterization of the karyotype of proasellus meridianusby differential staining techniques. Caryologia. 42 (3-4), pp. 235-242. https://doi.org/10.1080/00087114.1989.10796970