Life Sciences

Eskildsen, S.F., Coupé, P., Fonov, V., Manjón, J.V., Leung, K.K., Guizard, N., Wassef, S.N., Østergaard, L.R., Collins, D.L., Alzheimer's Disease Neuroimaging Initiative and Whitcher, B. 2012. BEaST: brain extraction based on nonlocal segmentation technique. NeuroImage. 59 (3), pp. 2362-2373. https://doi.org/10.1016/j.neuroimage.2011.09.012

Cho, Y., Seong, J.K., Jeong, Y., Shin, S.Y., Alzheimer's Disease Neuroimaging Initiative and Whitcher, B. 2012. Individual subject classification for Alzheimer's disease based on incremental learning using a spatial frequency representation of cortical thickness data. NeuroImage. 59 (3), pp. 2217-2230. https://doi.org/10.1016/j.neuroimage.2011.09.085

Shen, K.K., Fripp, J., Mériaudeau, F., Chételat,G., Salvado, O., Bourgeat, P., Alzheimer's Disease Neuroimaging Initiative and Whitcher, B. 2012. Detecting global and local hippocampal shape changes in Alzheimer's disease using statistical shape models. NeuroImage. 59 (3), pp. 2155-2166. https://doi.org/10.1016/j.neuroimage.2011.10.014

Carmichael, O., Xie, J., Fletcher, E., Singh, B., DeCarli, C., Alzheimer's Disease Neuroimaging Initiative and Whitcher, B. 2012. Localized hippocampus measures are associated with Alzheimer pathology and cognition independent of total hippocampal volume. Neurobiology of Aging. 33 (6), pp. 1124.e31-1124.e41. https://doi.org/10.1016/j.neurobiolaging.2011.08.016

Leach, M.O., Morgan, B., Tofts, P.S., Buckley, D.L., Huang, W., Horsfield, M.A., Chenevert, T.L., Collins, D.J., Jackson, A., Lomas, D., Whitcher, B., Clarke, L., Plummer, R., Judson, I., Jones, R., Alonzi, R., Brunner, T., Koh, D.M., Murphy, P., Waterton, J.C., Parker, G., Graves, M.J., Scheenen, T.W.J., Redpath, T.W., Orton, M., Karczmar, G., Huisman, H., Barentsz, J. and Padhani, A. 2012. Imaging vascular function for early stage clinical trials using dynamic contrast-enhanced magnetic resonance imaging. European Radiology. 22, pp. 1451-1464. https://doi.org/10.1007/s00330-012-2446-x

Comley, R.A., Cervenka, S., Palhagen, S.E., Panagiotidis, G., Matthews, J.C., Lai, R.Y., Halldin, C., Farde, L., Nichols, T.E. and Whitcher, B. 2012. A Comparison of Gray Matter Density in Restless Legs Syndrome Patients and Matched Controls Using Voxel-Based Morphometry. Journal of Neuroimaging. 22 (1), pp. 28-32. https://doi.org/10.1111/j.1552-6569.2010.00536.x

Dauvermann, M.R., Moorhead, T.W., Watson, A.R., Duff, B., Romaniuk, L., Hall, J., Roberts, N., Lee, G.L., Hughes, Z.A., Brandon, N.J., Whitcher, B., Blackwood, D.H., McIntosh, A.M. and Lawrie, S.M. 2012. Verbal working memory and functional large-scale networks in schizophrenia. Psychiatry Research: Neuroimaging. 270, pp. 86-96. https://doi.org/10.1016/j.pscychresns.2017.10.004

Schott, J.M., ADNI Investigators and Whitcher, B. 2012. Using CSF biomarkers to replicate genetic associations in Alzheimer's disease. Neurobiology of Aging. 33 (7), pp. 1486.e9-1486.e15. https://doi.org/10.1016/j.neurobiolaging.2011.02.008

Akito Tateishi, Sarah K. Coleman, Satoshi Migita, Kari Keinänen and Tetsuya Haruyama 2012. Post-Synapse Model Cell for Synaptic Glutamate Receptor (GluR)-Based Biosensing: Strategy and Engineering to Maximize Ligand-Gated Ion-Flux Achieving High Signal-to-Noise Ratio. Sensors. 12 (1), pp. 1035-1041. https://doi.org/10.3390/s120101035

Semenov, A., Möykkynen, T., Coleman, S.K., Korpi, E.R. and Keinänen, K. 2012. Autoinactivation of the stargazin-AMPA receptor complex: subunit-dependency and independence from physical dissociation. PLoS ONE. 7 (11) e49282. https://doi.org/10.1371/journal.pone.0049282

Jain, S., Ranjan, P., Sengupta, D. and Naik, P.K. 2012. TpPred: A Tool for Hierarchical Prediction of Transport Proteins Using Cluster of Neural Networks and Sequence Derived Features. International Journal for Computational Biology. 1 (1), pp. 28-36.

Corpas, M. 2012. A genome blogger manifesto. GigaScience. 1 (1) 15. https://doi.org/10.1186/2047-217x-1-15

Corpas, M. 2012. A family experience of personal genomics. Journal of Genetic Counseling. 21 (3), pp. 386-391. https://doi.org/10.1007/s10897-011-9473-7

Corpas, M., Fatumo, S. and Schneider, R. 2012. How not to be a bioinformatician. Source Code for Biology and Medicine. 7 3. https://doi.org/10.1186/1751-0473-7-3

Swaminathan, G.J., Bragin, E., Chatzimichali, E.A., Corpas, M., Bevan, A.P., Wright, C.F., Carter, N.P., Hurles, M.E. and Firth, H.V. 2012. DECIPHER: web-based, community resource for clinical interpretation of rare variants in developmental disorders. Human Molecular Genetics. 21 (R1), pp. R37-R44. https://doi.org/10.1093/hmg/dds362

Corpas, M., Bragin, E., Clayton, S., Bevan, P. and Firth, H.V. 2012. Interpretation of genomic copy number variants using DECIPHER. Current Protocols in Human Genetics. Chapter 8:Unit 8.14. https://doi.org/10.1002/0471142905.hg0814s72

Corpas, M. 2012. Spanish cuts: more economic damage. Nature. 487 38. https://doi.org/10.1038/487038d

De Colibus, L., Sonnen, A.F.-P., Morris, K.J., Siebert, C.A., Abrusci, P., Plitzko, J., Hodnik, V., Leippe, M., Volpi, E., Anderluh, G. and Gilbert, R.J.C. 2012. Structures of lysenin reveal a shared evolutionary origin for pore-forming proteins and its mode of sphingomyelin recognition. Structure. 20 (9), pp. P1498-1507. https://doi.org/10.1016/j.str.2012.06.011

Zhou, Xiang, Laroche, Fabrice, Lamers, Gerda E. M., Torraca, V., Voskamp, Patrick, Lu, Tao, Chu, Fuqiang, Spaink, Herman P., Abrahams, Jan Pieter and Liu, Zunfeng 2012. Ultra-small graphene oxide functionalized with polyethylenimine (PEI) for very efficient gene delivery in cell and zebrafish embryos. Nano Research. 5, pp. 703-709. https://doi.org/10.1007/s12274-012-0254-x

Inkster, B., Rao, A.W., Ridler, K., Filippini, N., Whitcher, B., Nichols, T.E., Wetten, S., Gibson, R.A., Borrie, M., Kertesz, A., Guzman, D.A., Loy-English, I., Williams, J., Saemann, P.G., Auer, D.P., Holsboer, F., Tozzi, F., Muglia, P., Merlo-Pich, E. and Matthews, P.M. 2012. Genetic variation in GOLM1 and prefrontal cortical volume in Alzheimer's disease. Neurobiology of Aging. https://doi.org/10.1016/j.neurobiolaging.2010.04.018

Torsney, E., Pirianov, G., Charolidi, N., Shoreim, A., Gaze, D.C., Petrova, S., Laing, K., Meisinger, T., Xiong, W., Baxter, B.T. and Cockerill, G.W. 2012. Elevation of plasma high-density lipoproteins inhibits development of experimental abdominal aortic aneurysms. Arteriosclerosis, Thrombosis, and Vascular Biology. 32 (11), pp. 2678-2686. https://doi.org/10.1161/atvbaha.112.00009

Mehta, R., Gaze, D.C., Mohan, S., Williams, K.L., Sprung, V., George, K., Jeffries, R., Hudson, Z., Perry, M. and Shave, R. 2012. Post-exercise cardiac troponin release is related to exercise traning history. International Journal of Sports Medicine. 33 (5), pp. 333-337. https://doi.org/10.1055/s-0031-1301322

Ong, P., Sivanathan, R., Borgulya, G., Bizrah, M., Iqbal, Y., Andoh, J., Gaze, D.C. and Kaski, J.C. 2012. Obesity, inflammation and brachial artery flow-mediated dilatation: Therapeutic targets in patients with microvascular angina (Cardiac Syndrome X). Cardiovascular Drugs and Therapy. 26, p. 239–244. https://doi.org/10.1007/s10557-012-6382-4

Abbott, N.J., Dolman, D.E.M., Drndarski, S. and Fredriksson, S.M. 2012. An Improved in Vitro Blood-Brain Barrier Model: Rat Brain Endothelial Cells Co-Cultured With Astrocytes. Methods in Molecular Biology. 814, pp. 415-430. https://doi.org/10.1007/978-1-61779-452-0_28

Dutton, P.J., Warrander, L.K., Roberts, S.A., Bernatavicius, G., Byrd, L.M., Gaze, D.C., Kroll, J., Jones, R.L., Sibley, C.P., Freen, J. F. and Heazell, A.E.P. 2012. Predictors of Poor Perinatal Outcome following Maternal Perception of Reduced Fetal Movements: A Prospective Cohort Study. PLoS ONE. 7 (7) e39784. https://doi.org/10.1371/journal.pone.0039784

Gaze, D.C. 2012. Novel biomarkers of cardiac ischemia: where are we at? Biomarkers in Medicine. 6 (5), pp. 633-635. https://doi.org/10.2217/bmm.12.55

George, K., Whyte, G.P., Green, D.J., Oxborough, D., Shave, R.E., Gaze, D.C. and Somauroo, J. 2012. The endurance athletes heart: acute stress and chronic adaptation. British Journal of Sports Medicine. 46 (1), pp. 129-136. https://doi.org/10.1136/bjsports-2012-091141

Collinson, P., Goodacre. S., Gaze, D.C. and Gray, A. 2012. Very early diagnosis of chest pain by point-of-care testing: comparison of the diagnostic efficiency of a panel of cardiac biomarkers compared with troponin measurement alone in the RATPAC. Heart. 98 (4). https://doi.org/10.1136/heartjnl-2011-300723

Godfrey, A.L., Chen, E., Pagano, F., Ortmann, C.A., Silber, Y., Belosillo, B., Guglielmelli, P., Harrison, C., Reilly, J.T., Stegelmann, F., Bijou, F., Lippert, E., McMullin, M.F., Boiron, J.M., Doehner, K., Vannucchi, A.M., Besses, C., Campbell, P.J. and Green, A.R. 2012. JAK2V617F homozygosity arises commonly and recurrently in PV and ET, but PV is characterized by expansion of a dominant homozygous subclone. Blood. 120, pp. 2704-2707. https://doi.org/10.1182/blood-2012-05-431791

Chen, E., Staudt, L.M. and Green, A.R. 2012. Janus kinase deregulation in leukemia and lymphoma (Review). Immunity. 36 (4), pp. 529-541. https://doi.org/10.1016/j.immuni.2012.03.017

Gaze, D.C. 2012. Getting to the heart of the matter: Cardiac troponin as a cardiovascular biomarker. New York Nova Science Publishers.

Gaze, D.C. 2012. Cardiovascular Biomarkers for the Detection of Cardiovascular Disease. in: Gaze, D.C. (ed.) Coronary Artery Disease: Current concepts in Epidemiology, Pathophysiology, Diagnostics and Treatment Croatia InTech Publishing. pp. 103-122

Gaze, D.C. (ed.) 2012. Coronary Artery Disease: Current concepts in Epidemiology, Pathophysiology, Diagnostics and Treatment. Croatia InTech Publishing.

Gaze, D.C. (ed.) 2012. The Cardiovascular system. Croatia InTech Publishing.

Zhang, D., Muller, J.-P., Lavender, S., Walton, D. and Dartnell, L. 2012. Fluorescent analysis of photosynthetic microbes and Polycyclic Aromatic Hydrocarbons linked to optical remote sensing. International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences. XXXIX-B8, pp. 555-559. https://doi.org/10.5194/isprsarchives-XXXIX-B8-555-2012

Arora, T., Loo, R.L., Anastasovska, J., Gibson, G.R., Tuohy, K., Kumar Sharma, R., Swann Jonathan, Deaville, E.R., Sleeth Michelle, L., Thomas, E.L., Holmes, E., Bell, J.D. and Frost, G.S. 2012. Differential effects of two fermentable carbohydrates on central appetite regulation and body composition. PLoS ONE. 7 (8) e43263. https://doi.org/10.1371/journal.pone.0043263

Cuthbertson, D.J., Irwin, A., Gardner, C.J., Daousi, C., Purewal, T, Furlong, N, Goenka, N, Thomas, E.L., Adams, V.L., Pushpakom, SP, Pirmohamed, M and Kemp, G.J. 2012. Improved Glycaemia correlates with liver fat reduction in obese, type 2 diabetes, patients given glucagon-like peptide-1 (GLP-1) receptor agonists. PLoS ONE. 7 (12) e50117. https://doi.org/10.1371/journal.pone.0050117

Mehta, K., Patel, V., Busbridge Mark, Renshaw, D., Zariwala, M., Evans, R. and Farnaud, S. 2012. Increased transferrin-bound iron uptake in HepG2 cells is followed by an increase in expression of the iron hormone hepcidin pre-and post-translationally. European Iron Club Annual Meeting 2012. Rennes, France 29 - 31 Aug 2012

Zariwala, M., Farnaud, S. and Renshaw, D. 2012. Comparison of iron absorption from iron supplement preparations using an in vitro Caco-2 model. European Iron Club Annual Meeting 2012. Rennes, France 29 - 31 Aug 2012

Kosicka, A., Renshaw, D. and Zariwala, M. 2012. DPPIV and macronutrients regulate the expression of PYY3–36 in human gut epithelial cells. Society for Endocrinology BES 2012. Harrogate, UK Mar - Apr 2012 BioScientifica Ltd.. https://doi.org/10.1530/endoabs.31.P197