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Laser microdissection and pressure catapulting of single human motor neurons for RNA editing analysis

Book chapter

Sun, H., Raja, A., O’Connell, M.A., Mann, V., Noble, B. and Keegan, L.P. 2011. Laser microdissection and pressure catapulting of single human motor neurons for RNA editing analysis. in: RNA and DNA Editing: Methods and Protocols Humana Press. pp. 75–87

Blunting of adaptive responses to resistance exercise training in women over 75y

Journal article

Greig, C.A., Gray, C., Rankin, D., Young, A., Mann, V., Noble, B. and Atherton, P.J. 2011. Blunting of adaptive responses to resistance exercise training in women over 75y. Experimental Gerontology. 46 (11), pp. 884-890. https://doi.org/10.1016/j.exger.2011.07.010

Guide to Receptors and Channels (GRAC), 5th edition

Article

Alexander, S.P., Mathie, A. and Peters, J.A. 2011. Guide to Receptors and Channels (GRAC), 5th edition. British Journal of Pharmacology. 164 (S1). https://doi.org/10.1111/j.1476-5381.2011.01649_1.x

Artificial trans fatty acids in food supply: A global health threat

Journal article

Salomaa V.K. and Tewfik, I. 2011. Artificial trans fatty acids in food supply: A global health threat. World Journal of Science, Technology and Sustainable Development. 8 (4), pp. 361-401. https://doi.org/10.1108/20425945201100017

Can adult neural stem cells create New Brains? plasticity in the adult mammalian neurogenic niches: Realities and expectations in the Era of regenerative biology

Journal article

Kazanis, I. 2011. Can adult neural stem cells create New Brains? plasticity in the adult mammalian neurogenic niches: Realities and expectations in the Era of regenerative biology. The Neuroscientist. 18 (1), pp. 15-27. https://doi.org/10.1177/1073858410390379

The Number of Stem Cells in the Subependymal Zone of the Adult Rodent Brain is Correlated with the Number of Ependymal Cells and Not with the Volume of the Niche

Journal article

Kazanis, I. and ffrench-Constant, C. 2011. The Number of Stem Cells in the Subependymal Zone of the Adult Rodent Brain is Correlated with the Number of Ependymal Cells and Not with the Volume of the Niche. Stem Cells and Development. 21 (7). https://doi.org/10.1089/scd.2011.0130

Extracellular matrix and the neural stem cell niche

Article

Kazanis, I. 2011. Extracellular matrix and the neural stem cell niche. Developmental Neurobiology. 71 (11), pp. 1006-1017. https://doi.org/10.1002/dneu.20970

Trekking poles reduce exercise-induced muscle injury during mountain walking

Journal article

Howatson, G., Hough, P., Pattison, J., Hill, J., Blagrove, R., Glaister, M. and Thompson, Kevin G. 2011. Trekking poles reduce exercise-induced muscle injury during mountain walking. Medicine and Science in Sports and Exercise. https://doi.org/10.1249/mss.0b013e3181e4b649

Rapid reductions in left ventricular mass following a community based 12-week prevention programme are partially predicted by change in fat depots

Article

Jenni, S., Tillin, T., Park, C.M., Baker, M.D., Thomas, E.L., Bell, J.D., Connolly, S.B., Wood, D.A., Hughes, A.D. and Chaturvedi, N. 2011. Rapid reductions in left ventricular mass following a community based 12-week prevention programme are partially predicted by change in fat depots. European Heart Journal.

Mechanism for the Differential Effect of the Long-Acting Insulin Analog Detemir on Weight in Patients with Type 2 Diabetes

Article

Sheldon, Ben, Alsini, Najlaa, Zachariah, Sunil, Shojaee-Moradie, Fariba, Bodinham, Caroline, Robertson, Denise, Bell, Jimmy, Thomas, E. Louise, Vidal, Hubert, Meugnier, Emmanuelle, Jones, Richard H., Umpleby, A.M. and Russell-Jones, David 2011. Mechanism for the Differential Effect of the Long-Acting Insulin Analog Detemir on Weight in Patients with Type 2 Diabetes. Diabetes. 60 (Supplement 1), pp. A263-A264. https://doi.org/10.2337/db11-868-1281

Effects of 8 weeks oligofructose supplementation on appetite and body weight in overweight and obese adults

Article

Daud, N.M., Ismail, N., Thomas, E.L., Scholtz, S., Durighel, G., Fitzpatrick, J.A., Goldstone, A.P., Bell, J.D., Bech, P.R., Chambers, E., Chhina, N., Ghatei, M.A., Pedersen, C. and Frost, G.S. 2011. Effects of 8 weeks oligofructose supplementation on appetite and body weight in overweight and obese adults. Proceedings of the Nutrition Society. 70 (Issue OCE6: Winter Meeting, 6–7 December 2011, 70th Anniversary: Body weight regulation – food, gut and brain signalling) E374. https://doi.org/10.1017/s0029665111004599

Impact of liver fat on the response of plasma triacylglycerol to diets high and low in extrinsic sugars

Article

Ahmad, A., Isherwood, C., Bell, J. D., Thomas, E. L., Frost, G., Umpleby, M. and Griffin, B. A. 2011. Impact of liver fat on the response of plasma triacylglycerol to diets high and low in extrinsic sugars. Proceedings of the Nutrition Society. 70 (Issue OCE6: Winter Meeting, 6–7 December 2011, 70th Anniversary: Body weight regulation – food, gut and brain signalling) E364. https://doi.org/10.1017/s0029665111004496

PedVacc001: Safety and Immunogenicity of a Candidate HIV-1 Vaccine, MVA. HIVA, Administered to Healthy Gambian Infants Born to HIV-1/2-Uninfected Mothers

Conference item

Afolabi, M, Ndure, J, Mueller, J, Thomas, V, Shams-Rony, M, Borthwick, N, Bridgeman, A, Black, A, Reilly, M, Jaoko, W and others 2011. PedVacc001: Safety and Immunogenicity of a Candidate HIV-1 Vaccine, MVA. HIVA, Administered to Healthy Gambian Infants Born to HIV-1/2-Uninfected Mothers. AIDS Vaccine Conference. Bangkok, Thailand 12 - 15 Sep 2011

The Role of the Fc Region in CD70-specific Antibody Effects on Cardiac Transplant Survival

Journal article

Jurcevic, S., Shariff, H., Greenlaw, R.E., Meader, L., Gardner, N., Yagita, H., Coccia, M. and Mamode, N. 2011. The Role of the Fc Region in CD70-specific Antibody Effects on Cardiac Transplant Survival. Transplantation. 92 (11), pp. 1194-1201. https://doi.org/10.1097/TP.0b013e3182347ecd

Characterisation of T cells induced by candidate prophylactic vaccines encoding a HIV-1 conserved immunogen in phase I/IIa trial HIVCORE002

Conference item

Ahmed, T., Borthwick, N., Yang, H., Hancock, G., Yorke, L., Black, A., Ebrahimsa, U., Rose, A., Dorrell, L. and Hanke, T. 2011. Characterisation of T cells induced by candidate prophylactic vaccines encoding a HIV-1 conserved immunogen in phase I/IIa trial HIVCORE002. Annual Congress of the British Society for Immunology 2011. Liverpool, United Kingdom 05 - 08 Dec 2011

Comparison between serum insulin levels and its resistance with biochemical, clinical and anthropometric parameters in South Indian children and adolescents

Journal article

Srinivasa Nageswara, Rao G., Prema, G., Gururajan, P., Arumugam, S.B., Kirthivasan, V., Saibabu, R. and Cherian, K.M. 2011. Comparison between serum insulin levels and its resistance with biochemical, clinical and anthropometric parameters in South Indian children and adolescents. Indian Journal of Clinical Biochemistry. 26, pp. 22-27. https://doi.org/10.1007/s12291-010-0069-z

Plasma total nitric oxide and endothelial constitutive nitric oxide synthase (ecNOS) gene polymorphism: a study in a South Indian population.

Journal article

Gururajan, P., Gurumurthy, P., Victor, D., Srinivasa Nageswara, R.ao G, Sai Babu, R., Sarasa Bharati, A. and Cherian, K.M. 2011. Plasma total nitric oxide and endothelial constitutive nitric oxide synthase (ecNOS) gene polymorphism: a study in a South Indian population. Biochemical Genetics. 49, pp. 96-103. https://doi.org/10.1007/s10528-010-9391-7

Serum E-selectin levels in Indian children and adolescents: relation to clinical and biochemical parameters.

Journal article

Rao, G.S., Gurumurthy, P., Gururajan, P., Saibabu, R. and Cherian, K.M. 2011. Serum E-selectin levels in Indian children and adolescents: relation to clinical and biochemical parameters. Pediatrics International. 53 (1), pp. 40-45. https://doi.org/10.1111/j.1442-200x.2010.03191.x

Artemisinins act through at least two targets in a yeast model

Journal article

Moore, Catherine M., Hoey, Elizabeth M., Trudgett, Alan and Timson, David J. 2011. Artemisinins act through at least two targets in a yeast model. FEMS Yeast Research. 11 (2), pp. 233-237. https://doi.org/10.1111/j.1567-1364.2010.00706.x

Pathogenicity of Misfolded and Dimeric HLA-B27 Molecules

Journal article

Antoniou, A.N., Lenart, I. and Guiliano, D.B. 2011. Pathogenicity of Misfolded and Dimeric HLA-B27 Molecules. International Journal of Rheumatology. 2011 Article ID 486856. https://doi.org/10.1155/2011/486856

The Oxidative Folding and Misfolding of Human Leukocyte Antigen-B27

Journal article

Antoniou, A.N., Guiliano, D.B., Lenart, I., Burn, G. and Powis, S.J. 2011. The Oxidative Folding and Misfolding of Human Leukocyte Antigen-B27. Antioxidants and Redox Signaling. 15 (2), pp. 669-684. https://doi.org/10.1089/ars.2010.3692

Neurofibrillary tangle pathology and Braak staging in chronic epilepsy in relation to traumatic brain injury and hippocampal sclerosis: A post-mortem study

Journal article

Thom, M., Liu, J.Y.W., Thompson, P., Phadke, R., Narkiewicz, M., Martinian, L., Marsdon, D., Koepp, M., Caboclo, L., Catarino, C.B. and Sisodiya, S.M. 2011. Neurofibrillary tangle pathology and Braak staging in chronic epilepsy in relation to traumatic brain injury and hippocampal sclerosis: A post-mortem study. Brain. 134 (10), pp. 2969-2981. https://doi.org/10.1093/brain/awr209

Dravet syndrome as epileptic encephalopathy: Evidence from long-term course and neuropathology

Journal article

Catarino, C.B., Liu, J.Y.W., Liagkouras, I., Gibbons, V.S., Labrum, R.W., Ellis, R., Woodward, C., Davis, M.B., Smith, S.J., Cross, J.H., Appleton, R.E., Yendle, S.C., McMahon, J.M., Bellows, S.T., Jacques, T.S., Zuberi, S.M., Koepp, M.J., Martinian, L., Scheffer, I.E., Thom, M. and Sisodiya, S.M. 2011. Dravet syndrome as epileptic encephalopathy: Evidence from long-term course and neuropathology. Brain. 134 (10), pp. 2982-3010. https://doi.org/10.1093/brain/awr129

DCE-MRI biomarkers of tumour heterogeneity predict CRC liver metastasis shrinkage following bevacizumab and FOLFOX-6

Journal article

O'Connor, J.P.B., Rose, C.J., Jackson, A., Watson, Y., Cheung, S., Maders, F., Whitcher, B.J., Roberts, C., Buonaccorsi, G.A., Thompson, G., Clamp, A.R., Jayson, G.C. and Parker, G.J.M. 2011. DCE-MRI biomarkers of tumour heterogeneity predict CRC liver metastasis shrinkage following bevacizumab and FOLFOX-6. British Journal of Cancer. 105, pp. 139-145. https://doi.org/10.1038/bjc.2011.191

Validation and pilot application of [ 18F]FDG-PET in evaluation of a metabolic therapy for Alzheimer's disease

Journal article

Tzimopoulou, S., Cunningham, V.J., Nichols, T.E., Searle, G., Bird, N.P., Mistry, P., Dixon, I.J., Hallett, W.A., Whitcher, B., Brown, A.P., Zvartau-Hind, M., Lotay, N., Lai, R.Y.K., Castiglia, M., Jeter, B., Matthews, J.C., Chen, K., Bandy, D., Reiman, E.M., Gold, M., Rabiner, E.A. and Matthews, P.M. 2011. Validation and pilot application of [ 18F]FDG-PET in evaluation of a metabolic therapy for Alzheimer's disease. Advances in Alzheimer's Disease. 2, pp. 627-642. https://doi.org/10.3233/978-1-60750-793-2-627

Image analysis and statistical inference in neuroimaging with R

Journal article

Tabelow, K., Clayden, J.D., Lafaye de Micheaux, P., Polzehl, J., Schmid, V.J. and Whitcher, B. 2011. Image analysis and statistical inference in neuroimaging with R. NeuroImage. 55 (4), pp. 1686-1693. https://doi.org/10.1016/j.neuroimage.2011.01.013

DTI measures in crossing-fibre areas: Increased diffusion anisotropy reveals early white matter alteration in MCI and mild Alzheimer's disease

Journal article

Douaud, G., Jbabdi, S., Behrens, T.E.J., Menke, R.A., Gass, A., Monsch, A.U., Rao, A., Whitcher, B., Kindlmann, G., Matthews, P.M. and Smith, S. 2011. DTI measures in crossing-fibre areas: Increased diffusion anisotropy reveals early white matter alteration in MCI and mild Alzheimer's disease. NeuroImage. 55 (3), pp. 880-890. https://doi.org/10.1016/j.neuroimage.2010.12.008

Quantitative analysis of dynamic contrast-enhanced and diffusion-weighted magnetic resonance imaging for oncology in R

Journal article

Whitcher, B. and Schmid, V.J. 2011. Quantitative analysis of dynamic contrast-enhanced and diffusion-weighted magnetic resonance imaging for oncology in R. Journal of Statistical Software. 44 (5), pp. 1-29. https://doi.org/10.18637/jss.v044.i05

Special volume on Magnetic Resonance Imaging in R

Edited issue

Tabelow, K. and Whitcher, B. 2011. Special volume on Magnetic Resonance Imaging in R. Journal of Statistical Software. 44 (1), pp. 1-6. https://doi.org/10.18637/jss.v044.i01

Working with the DICOM and NIfTI data standards in R

Journal article

Whitcher, B., Schmid, V.J. and Thornton, A. 2011. Working with the DICOM and NIfTI data standards in R. Journal of Statistical Software. 44 (6), pp. 1-29. https://doi.org/10.18637/jss.v044.i06

Spatial patterns of brain amyloid-beta burden and atrophy rate associations in mild cognitive impairment.

Journal article

Tosun, D., Schuff, N., Mathis, C.A., Jagust, W., Weiner, M.W., Alzheimer's Disease NeuroImaging Initiative and Whitcher, B. 2011. Spatial patterns of brain amyloid-beta burden and atrophy rate associations in mild cognitive impairment. Brain. 134 (4), p. 1077–1088. https://doi.org/10.1093/brain/awr044

Mild cognitive impairment: baseline and longitudinal structural MR imaging measures improve predictive prognosis.

Journal article

McEvoy, L.K., Holland, D., Hagler, D.J., Fennema-Notestine, C., Brewer, J.B., Dale, A.M., Alzheimer's Disease Neuroimaging Initiative and Whitcher, B. 2011. Mild cognitive impairment: baseline and longitudinal structural MR imaging measures improve predictive prognosis. Radiology. 259 (3), pp. 834-843. https://doi.org/10.1148/radiol.11101975

Fine mapping of genetic variants in BIN1, CLU, CR1 and PICALM for association with cerebrospinal fluid biomarkers for Alzheimer's disease.

Journal article

Kauwe, J.S., Cruchaga, C., Karch, C.M., Sadle, B., Lee, M., Mayo, K., Latu, W., Su'a, M., Fagan, A.M., Holtzman, D.M., Morris, J.C., Alzheimer's Disease Neuroimaging Initiative, Goate, A.M. and Whitcher, B. 2011. Fine mapping of genetic variants in BIN1, CLU, CR1 and PICALM for association with cerebrospinal fluid biomarkers for Alzheimer's disease. PLoS ONE. 6 (2) e15918. https://doi.org/10.1371/journal.pone.0015918

Cold-adapted protease enables quantitation of surface proteins in the absence of membrane trafficking.

Journal article

Ahmad, F., Coleman, S.K., Kaila, K. and Blaesse, P. 2011. Cold-adapted protease enables quantitation of surface proteins in the absence of membrane trafficking. BioTechniques. 50 (4), pp. 255-257. https://doi.org/10.2144/000113651

Mode of interaction of calcium oxalate crystal with human phosphate cytidylyltransferase 1: a novel inhibitor purified from human renal stone matrix

Journal article

Pathak, P., Naik, P.K., Sengupta, D., Singh, S.K. and Tandon, C. 2011. Mode of interaction of calcium oxalate crystal with human phosphate cytidylyltransferase 1: a novel inhibitor purified from human renal stone matrix. Journal of Biomedical Science and Engineering. 4 (9), pp. 591-598. https://doi.org/10.4236/jbise.2011.49075

Bamako 2009 Conference on the Bioinformatics of Infectious Diseases

Edited issue

Corpas, M., Doumbia, S., Gascuel, O. and Mulder, N. 2011. Bamako 2009 Conference on the Bioinformatics of Infectious Diseases. Infection, Genetics and Evolution. 11 (4), pp. 695-697. https://doi.org/10.1016/j.meegid.2011.02.012

myKaryoView: a light-weight client for visualization of genomic data

Journal article

Jimenez, R.C., Salazar, G.A., Gel, B., Dopazo, J., Mulder, N. and Corpas, M. 2011. myKaryoView: a light-weight client for visualization of genomic data. PLoS ONE. 6 (10) e26345. https://doi.org/10.1371/journal.pone.0026345

A family with autism and rare copy number variants disrupting the Duchenne/Becker muscular dystrophy gene DMD and TRPM3

Journal article

Pagnamenta, A.T., Holt, R., Yusuf, M., Pinto, D., Wing, K., Betancur, C., Scherer, S.W., Volpi, E.V. and Monaco, A.P. 2011. A family with autism and rare copy number variants disrupting the Duchenne/Becker muscular dystrophy gene DMD and TRPM3. Journal of Neurodevelopmental Disorders. 3, pp. 124-131. https://doi.org/10.1007/s11689-011-9076-5

Characterization of a dominant cone degeneration in a green fluorescent protein-reporter mouse with disruption of Loci associated with human dominant retinal dystrophy.

Journal article

Lipinski, D.M., Yusuf, M., Barnard, A.R., Damant, C., Charbel Issa, P., Singh, M.S., Lee, E., Davies, W.L., Volpi, E.V. and MacLaren R.E. 2011. Characterization of a dominant cone degeneration in a green fluorescent protein-reporter mouse with disruption of Loci associated with human dominant retinal dystrophy. Investigative Ophthalmology & Visual Science. 52 (9), pp. 6617-6623. https://doi.org/10.1167/iovs.11-7932

Perforin activity at membranes leads to invaginations and vesicle formation

Journal article

Praper, T., Sonnen, A.F., Kladnik, A., Andrighetti, A.O., Viero, G., Morris, K.J., Volpi, E.V., Lunelli, L., Dalla Serra, M., Froelich, C.J., Gilbert, R.J. and Anderluh, G. 2011. Perforin activity at membranes leads to invaginations and vesicle formation. Proceedings of the National Academy of Sciences of the United States of America. 108 (52). https://doi.org/10.1073/pnas.1107473108


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