Life Sciences

Malavige, Gathsaurie Neelika, Jones, Louise, Black, Antony Paul and Ogg, Graham Stuart 2007. Rapid effector function of varicella-zoster virus glycoprotein I-specific CD4+ T cells many decades after primary infection. The Journal of Infectious Diseases. 195 (5), pp. 660-664. https://doi.org/10.1086/511274

Jones, Louise, Black, A., Malavige, Gathsaurie N and Ogg, Graham S 2007. Phenotypic analysis of human CD4+ T cells specific for immediate early 63 protein of varicella-zoster virus. European journal of immunology. 37 (12), pp. 3393-3403. https://doi.org/10.1002/eji.200737648

Majounie, E., Wardle, M., Muzaimi, M., Cross, W., Robertson, N.P., Williams, N.M. and Morris, H.R. 2007. Case control analysis of repeat expansion size in ataxia. Neuroscience Letters. 429 (1), pp. 28-32. https://doi.org/10.1016/j.neulet.2007.09.055

Ghedin, E., Wang, S., Spiro, D., Caler, E., Zhao, Q., Crabtree, J., Allen, J.E., Delcher, A.L., Guiliano, D.B., Miranda-Saavedra, D., Samuel V. Angiuoli, S.V., Todd Creasy, T., Paolo Amedeo, P., Brian Haas, B., El-Sayed, N.M., Wortman, J.R., Feldblyum, T., Tallon, L., Schatz, M., Shumway, M., Koo, H., Salzberg, S.L., Schobel, S., Pertea, M., Pop, M., White, O., Barton, G.J., Carlow, C.K.S., Crawford, M.J., Daub, J., Dimmic, M.W., Estes, C.F., Foster, J.M., Ganatra, M., Gregory, W.F., Johnson, N.M., Jinming Jin, J., Richard Komuniecki, R., Ian Korf, I., Sanjay Kumar, S., Sandra Laney, S., Ben-Wen Li, B-W., Wen Li, W., Lindblom, T.H., Lustigman, S., Ma, D., Maina, C.V., Martin, D.M.A., McCarter, J.P., McReynolds, L. and Mitreva, M. 2007. Draft Genome of the Filarial Nematode Parasite Brugia malayi. Science. 317 (5845), pp. 1756-1760. https://doi.org/10.1126/science.1145406

Anagnostopoulou, A., Jun Cao, Rozanne Arulanandam, Adina Vultur and Leda Raptis 2007. Differential effects of c-Ras upon transformation, adipocytic differentiation, and apoptosis mediated by the simian virus 40 large tumor antigen. Biochemistry and Cell Biology. 85 (1), pp. 32-48. https://doi.org/10.1139/o06-187

Anagnostopoulou, A., J. Cao, R. Arulanandam, A. Vultur and L. Raptis 2007. Adenovirus E1A requires c-Ras for full neoplastic transformation or suppression of differentiation of murine preadipocytes. Molecular Carcinogenesis. 46 (4), pp. 284-302. https://doi.org/10.1002/mc.20278

Aikaterini Anagnostopoulou, Jun Cao, Adina Vultur, Kevin Firth and Leda Raptis 2007. Examination of gap junctional, intercellular communication by in situ electroporation on two co-planar indium-tin oxide electrodes. Molecular Oncology. 1, p. 226–231. https://doi.org/10.1016/j.molonc.2007.06.002

Whitcher, B., Tuch, D.S., Wisco, J.J., Sorensen, A.G. and Wang, L. 2007. Using the wild bootstrap to quantify uncertainty in diffusion tensor imaging. Human Brain Mapping. 29 (3), pp. 346-362. https://doi.org/10.1002/hbm.20395

Whitcher, B., Wisco, J.J., Hadjikhani, N. and Tuch, D.S. 2007. Statistical group comparison of diffusion tensors via multivariate hypothesis testing. Magnetic Resonance in Medicine. 57 (6), pp. 1065-1074. https://doi.org/10.1002/mrm.21229

Schwarz, A.J., Whitcher, B., Gozzi, A., Reese, T. and Bifone, A. 2007. Study-level wavelet cluster analysis and data-driven signal models in pharmacological MRI. Journal of Neuroscience Methods. 159 (2), pp. 346-360. https://doi.org/10.1016/j.jneumeth.2006.07.017

Şendur, L., Suckling, J., Whitcher, B. and Bullmore, E. 2007. Resampling methods for improved wavelet-based multiple hypothesis testing of parametric maps in functional MRI. NeuroImage. 37 (4), pp. 1186-1194. https://doi.org/10.1016/j.neuroimage.2007.05.057

Rose, C.J., Mills, S., O'Connor, J.P.B., Buonaccorsi, G.A., Roberts, C., Watson, Y., Whitcher, B., Jayson, G., Jackson, A. and Parker, G.J.M. 2007. Quantifying heterogeneity in dynamic contrast-enhanced MRI parameter maps. MICCAI 2007: Medical Image Computing and Computer-Assisted Intervention – MICCAI 2007. Brisbane, Australia 29 Oct - 02 Nov 2007 Springer. https://doi.org/10.1007/978-3-540-75759-7_46

Li, H., Khirug, S., Cai, C., Ludwig, A., Blaesse, P., Kolikova, J., Afzalov, R., Coleman, S.K., Lauri, S., Airaksinen, M.S., Keinänen, K., Khiroug, L., Saarma, M., Kaila, K. and Rivera, C. 2007. KCC2 interacts with the dendritic cytoskeleton to promote spine development. Neuron. 56 (6), pp. P1019-1033. https://doi.org/10.1016/j.neuron.2007.10.039

Shamsir, M.S. and Dalby, A.R. 2007. Beta-sheet containment by flanking prolines: molecular dynamic simulations of the inhibition of beta-sheet elongation by proline residues in human prion protein. Biophysical Journal. 92 (6), pp. P2080-2089. https://doi.org/10.1529/biophysj.106.092320

Sengupta, D. 2007. Binding Modes, binding Affinities and ADME Screening of HIV-1 NNRTI Inhibitor: Efavirnez and its analogues. Online Journal of Bioinformatics. 8 (1), pp. 99-114.

Tandon, C., Aggarwal, A., Goel, P., Sengupta, D. and Naik, P.K. 2007. In-silico TAT-PTD prediction for cell penetrating peptides. Online Journal of Bioinformatics. 8 (1), pp. 115-138.

Sengupta, D., Verma, D. and Naik, P.K. 2007. Docking mode of delvardine and its analogues into the p66 domain of HIV-1 reverse transcriptase: Screening using molecular mechanics-generalized born/surface area and absorption, distribution, metabolism and excretion properties. Journal of Biosciences. 32 (3), pp. 1307-1316. https://doi.org/10.1007/s12038-007-0140-y

Sengupta, D., Verma, D. and Naik, P.K. 2007. Docking mode of delvardine and its analogues into the p66 domain of HIV-1 reverse transcriptase: screening using molecular mechanics-generalized born/surface area and absorption, distribution, metabolism and excretion properties. Journal of Biosciences. 32, pp. 1307-1316. https://doi.org/10.1007/s12038-007-0124-y

Gehlenborg, N., Corpas, M. and Janga, S.C. 2007. Highlights from the Third International Society for Computational Biology Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology. BMC Bioinformatics. 8 (Supplement 8) I1. https://doi.org/10.1186/1471-2105-8-s8-i1

Corpas, M. 2007. Folding patterns in protein sequences. PhD thesis University of Manchester https://doi.org/10.6084/m9.figshare.964811.v1

Corpas, M., Sinnott, J., Thorne, D., Pettifer, S., Attwood , T. and the PFF consortium 2007. PFF--an integrated database of residues and fragments critical for protein folding. BMC Systems Biology. 1 P48. https://doi.org/10.1186/1752-0509-1-S1-P48

Bendall, J.K., Rinze, R., Adlam, D., Tatham, A.L., de Bono, J., Wilson, N., Volpi, E. and Channon, K.M. 2007. Endothelial Nox2 overexpression potentiates vascular oxidative stress and hemodynamic response to angiotensin II: studies in endothelial-targeted Nox2 transgenic mice. Circulation Research. 100, pp. 1016-1025. https://doi.org/10.1161/01.res.0000263381.83835.7b

Wilson, N.D., Ross, L.J., Close, J., Mott, R., Crow, T.J. and Volpi, E.V. 2007. Replication profile of PCDH11X and PCDH11Y, a gene pair located in the non-pseudoautosomal homologous region Xq21.3/Yp11.2. Chromosome Research. 15, pp. 485-498. https://doi.org/10.1007/s10577-007-1153-y

Denham, A., Green, J., Hawkey, S., Ingram, J. and Greenwood, R. 2007. Changing with herbs: findings from a randomised, waiting-list controlled pilot study of care of women in the menopause by herbal practitioners. Focus on Alternative and Complementary Therapies. 12 (s1), p. 19. https://doi.org/10.1111/j.2042-7166.2007.tb05870.x

Romani, M., Muresu, R., Volpi, E.V., Rozzo, C., Marchi, J.M. and Casciano, I. 2007. Search for neuroblastoma loci: characterization of tumor cell lines that could facilitate their positional cloning. Journal of Neuro-oncology . 31, pp. 41-47. https://doi.org/10.1023/a:1005725112688

Prefumo, F., Sharma, R., Brecker, S. J., Gaze, D.C., Collinson, P.O. and Thilaganathan, B. 2007. Maternal cardiac function in early pregnancies with high uterine artery resistance. Ultrasound in Obstetrics & Gynecology. 29 (1), pp. 58-64. https://doi.org/10.1002/uog.3878

Gaze, D.C, Collinson, P.O. and Davies, S.J. 2007. Cardiac troponin in the forensic detection of cardiac contusion. Forensic Science International. 169 (2-3), p. 276. https://doi.org/10.1016/j.forsciint.2006.05.005

Middleton, N., Shave, R., George, K., Whyte, G., Simpson, R., Florida-James, G. and Gaze, D.C. 2007. Impact of repeated prolonged exercise bouts on Cardiac function and biomarkers. Medicine & Science in Sports & Exercise. 39 (1), pp. 83-90. https://doi.org/10.1249/01.mss.0000239395.93578.60

Gaze, D.C., Lawson, G. J., Harris, A. and Collinson, P.O. 2007. Evidence of Cardiomyocyte Necrosis in Glycogen Storage Disease type-II. Annals of Clinical Biochemistry: International Journal of Laboratory Medicine. 44 (1), pp. 86-88. https://doi.org/10.1258/000456307779596048

Banu, N.S., Gaze, D.C., Bruce, H., Collinson, P.O., Belli, A. and Manyonda, I.T. 2007. Markers of muscle ischaemia, necrosis and inflammation following uterine artery embolisation in the treatment of symptomatic uterine fibroids. American Journal of Obstetrics & Gynecology. 196 (3), pp. P213.E1-213.E5. https://doi.org/10.1016/j.ajog.2006.10.888

Middleton, N., Shave, R., George, K., Oxborough, D., Forster, J. and Gaze, D.C. 2007. Altered left ventricular diastolic filling following a marathon is a reproducible phenomenon. International Journal of Cardiology. 122 (1), pp. 87-89. https://doi.org/10.1016/j.ijcard.2006.11.042

Sharma, R., Gaze, D.C., Pellerin, D., Mehta, R.L., Gregson, H., Streather, C.P., Collinson, P.O. and Brecker, S.J.D. 2007. Evaluation of ischaemia-modified albumin as a marker of myocardial ischaemia in end-stage renal disease. Clinical Science. 113 (1), p. 25–32. https://doi.org/10.1042/cs20070015

Prefumo, F., Gaze, D.C., Papageorghiou, A. T., Collinson, P.O. and Thilaganathan, B. 2007. First trimester material serum ischaemia-modified albumin: a marker of hypoxia-ischaemia-driven early trophoblast development. Human Reproduction. 22 (7), p. 2029–2032. https://doi.org/10.1093/humrep/dem095

Galasko, G., Collinson, P.O., Barnes, S.C., Gaze, D.C., Lahiri, A. and Senior, R. 2007. Comparison of the clinical utility of atrial and B type natriuretic peptide measurement for the diagnosis of systolic dysfunction in a low-risk population. Journal of Clinical Pathology. 60 (5), pp. 570-572. https://doi.org/10.1136/jcp.2005.034306

Collinson, P.O. and Gaze, D.C. 2007. Biomarkers of cardiovascular damage. Medical Principles and Practice. 16 (4), pp. 247-261. https://doi.org/10.1159/000102146

Lim, T.K., Hayat, S.A., Gaze, D.C., Celik, E., Collinson, P.O. and Senior, R. 2007. Independent value of echocardiography and N-terminal pro-natriuretic peptide for prediction of major outcome in patients with suspected heart failure. The American Journal of Cardiology. 100 (5), pp. 870-875. https://doi.org/10.1016/j.amjcard.2007.04.027

Shave, R., George, K. and Gaze, D.C. 2007. The influence of exercise upon cardiac biomarkers: a practical guide for clinicians and scientists. Current Medicinal Chemistry. 14 (13), pp. 1427-1436. https://doi.org/10.2174/092986707780831177

Gaze, D.C. 2007. The role of existing and novel cardiac biomarkers for cardioprotection. Current Opinion in Investigational Drugs. 8 (9), pp. 711-717.

Collinson, P.O. and Gaze, D.C. 2007. Biomarkers of cardiovascular damage and dysfunction – An overview. Heart, Lung & Circulation. 16 (3), pp. S71-S82. https://doi.org/10.1016/j.hlc.2007.05.006

Shave, R., George, K., Atkinson, G., Hart, E, Middleton, N., Whyte, G., Gaze, D.C. and Collinson, P.O. 2007. Exercise-induced cardiac troponin T release: A meta-analysis. Medicine & Science in Sports & Exercise. 39 (12), pp. 2099-2106. https://doi.org/10.1249/mss.0b013e318153ff78